@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37660: (2016-08-02 )
MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGMEDLVQAFVERRKGKATEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARGEEQYVFADCAINIAPDSQDLAEIAIESANTAKMFDIEPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLDGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_C_3(2AF4)
PTAS_METTE
[Raw transfer]



COA_C_3(2AF4)
PTAS_METTE
[Raw transfer]



COA_D_4(2AF3)
PTAS_METTE
[Raw transfer]



GOL_A_3(1VMI)
EUTD_ECOLI
[Raw transfer]



GOL_A_3(1VMI)
EUTD_ECOLI
[Raw transfer]



GOL_A_2(1VMI)
EUTD_ECOLI
[Raw transfer]



TRS_A_2(4E4R)
PTAS_STAAR
[Raw transfer]



TRS_A_2(4E4R)
PTAS_STAAR
[Raw transfer]



COA_F_6(2AF3)
PTAS_METTE
[Raw transfer]



COA_E_5(2AF3)
PTAS_METTE
[Raw transfer]
27 PsiBlast_CBE 100.00100% 0 - C- -1TD9 - PTAS_BACSU -
26 PsiBlast_CBE 100.00100% 0 - C- -1TD9 - PTAS_BACSU -
25 PsiBlast_CBE 100.00100% 0 - C- -1TD9 - PTAS_BACSU -
23 PsiBlast_CBE 100.00100% 0 - C- -1TD9 - PTAS_BACSU -
1 PsiBlast_PDB 100.00100% 0 - C- -1TD9 - PTAS_BACSU -
42 HHSearch 99.09100% 0 - C- -1TD9 - PTAS_BACSU -
18 PsiBlast_CBE 98.53100% -89 - C3 -1XCO - PTAS_BACSU -
20 PsiBlast_CBE 98.50100% -90 - C3 -1XCO - PTAS_BACSU -
22 PsiBlast_CBE 98.48100% -88 - C3 -1XCO - PTAS_BACSU -
2 PsiBlast_PDB 97.97100% -92 - C3 -1XCO - PTAS_BACSU -
19 PsiBlast_CBE 97.87100% -91 - C3 -1XCO - PTAS_BACSU -
21 PsiBlast_CBE 97.36100% -89 - C3 -1XCO - PTAS_BACSU -
43 HHSearch 84.0166% -68 * C3 *4E4R 4.0 PTAS_STAAR
3 PsiBlast_PDB 83.2464% -67 - C3 -4E4R 4.0 PTAS_STAAR
44 HHSearch 80.9461% -58 - C3 -1R5J - ? -
4 PsiBlast_PDB 80.3959% -59 - C3 -1R5J - ? -
45 HHSearch 74.8542% -49 - C3 -1VMI 2.4 EUTD_ECOLI
46 HHSearch 72.7146% -19 - C3 -2AF4 4.8 PTAS_METTE
31 PsiBlast_CBE 72.7145% -32 - C3 -1QZT - PTAS_METTE -
7 PsiBlast_PDB 72.6245% -17 - C3 -2AF3 4.5 PTAS_METTE
5 PsiBlast_PDB 72.5945% -23 - C3 -2AF4 4.8 PTAS_METTE
28 PsiBlast_CBE 70.7545% -18 - C3 -2AF3 5.4 PTAS_METTE
8 PsiBlast_PDB 67.8543% -29 - C3 -1VMI 2.7 EUTD_ECOLI