@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37780: (2016-08-02 )
MTVTYAHEPFTDFTEAKNKTAFGESLAFVNTQLGKHYPLVINGEKIETDRKIISINPANKEEIIGYASTADQELAEKAMQAALQAFDSWKKQRPEHRANILFKAAAILRRRKHEFSSYLVKEAGKPWKEADADTAEAIDFLEFYARQMLKLKEGAPVKSRAGEVNQYHYEALGVGIVISPFNFPLAIMAGTAVAAIVTGNTILLKPADAAPVVAAKFVEVMEEAGLPNGVLNYIPGDGAEIGDFLVEHPKTRFVSFTGSRAVGCRIYERAAKVQPGQKWLKRVIAEMGGKDTVLVDKDADLDLAASSIVYSAFGYSGQKCSAGSRAVIHQDVYDEVVEKAVALTKTLTVGNPEDPDTYMGPVIHEASYNKVMKYIEIGKSEGKLLAGGEGDDSKGYFIQPTIFADVDENARLMQEEIFGPVVAICKARDFDHMLEIANNTEYGLTGALLTKNRAHIERAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAGGPDYLILHMQAKTTSEAF

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_3(2BHP)
?
[Raw transfer]




NAD_B_12(2EHU)
?
[Raw transfer]




NAP_B_10(2EHQ)
?
[Raw transfer]




NAD_A_5(2J5N)
?
[Raw transfer]




NAD_B_11(2J40)
?
[Raw transfer]




NAD_B_13(2J5N)
?
[Raw transfer]




NAD_A_10(2EIT)
?
[Raw transfer]




NAD_B_10(2BJK)
?
[Raw transfer]




NAD_B_12(2EII)
?
[Raw transfer]




NAD_A_3(2BJK)
?
[Raw transfer]




NAD_B_15(2BHP)
?
[Raw transfer]




NAD_B_12(2EIT)
?
[Raw transfer]




NAD_A_10(2EII)
?
[Raw transfer]




NAD_A_10(2EHU)
?
[Raw transfer]




NAP_A_9(2EHQ)
?
[Raw transfer]




NAD_A_5(2J40)
?
[Raw transfer]




ALA_A_7(2EJD)
?
[Raw transfer]




ALA_A_9(2EIT)
?
[Raw transfer]




GLU_B_4(2BHQ)
?
[Raw transfer]




GLU_A_3(2BHQ)
?
[Raw transfer]




DPR_A_7(2EJ6)
?
[Raw transfer]




DPR_B_8(2EJ6)
?
[Raw transfer]




FLC_B_11(2IY6)
?
[Raw transfer]




GLY_B_4(2J5N)
?
[Raw transfer]




FLC_A_3(2IY6)
?
[Raw transfer]




GLY_A_3(2J5N)
?
[Raw transfer]




PRO_A_6(4E3X)
AL4A1_MOUSE
[Raw transfer]




NAD_A_3(2BJA)
?
[Raw transfer]




NAD_B_7(2BJA)
?
[Raw transfer]




MPD_A_11(2EJD)
?
[Raw transfer]




MPD_A_11(2EJL)
?
[Raw transfer]




MPD_A_11(2EJ6)
?
[Raw transfer]




MPD_B_18(2EJD)
?
[Raw transfer]




MPD_B_16(2EIW)
?
[Raw transfer]




MPD_B_17(2EJ6)
?
[Raw transfer]




MRD_B_17(2IY6)
?
[Raw transfer]




MPD_A_11(2EIW)
?
[Raw transfer]




PRO_A_4(4E3X)
AL4A1_MOUSE
[Raw transfer]




MPD_B_18(2EJL)
?
[Raw transfer]




MRD_A_7(2IY6)
?
[Raw transfer]




119 HHSearch 94.9770% -76 - C4 -3QAN - ROCA1_BACHD -
1 PsiBlast_PDB 94.9369% -75 - C4 -3QAN - ROCA1_BACHD -
21 PsiBlast_CBE 94.2969% -72 - C4 -3QAN - ROCA1_BACHD -
52 PsiBlast_CBE 87.8346% -83 - C4 -4NMC - ? -
47 PsiBlast_CBE 87.8346% -86 - C4 -4NMF - ? -
54 PsiBlast_CBE 87.6046% -87 - C4 -4NMB - ? -
56 PsiBlast_CBE 87.5446% -85 - C4 -4NMA - ? -
58 PsiBlast_CBE 87.4546% -84 - C4 -4NM9 - ? -
116 HHSearch 87.3547% -85 - C4 -4NM9 - ? -
48 PsiBlast_CBE 87.3546% -85 - C4 -4NME - ? -
50 PsiBlast_CBE 87.2346% -85 - C4 -4NMD - ? -
49 PsiBlast_CBE 87.2246% -84 - C4 -4NME - ? -
55 PsiBlast_CBE 87.1746% -86 - C4 -4NMB - ? -
57 PsiBlast_CBE 87.1246% -84 - C4 -4NMA - ? -
46 PsiBlast_CBE 87.0946% -85 - C4 -4NMF - ? -
20 PsiBlast_PDB 87.0346% -84 - C4 -4NM9 - ? -
51 PsiBlast_CBE 86.9946% -84 - C4 -4NMD - ? -
53 PsiBlast_CBE 86.7646% -83 - C4 -4NMC - ? -
26 PsiBlast_CBE 83.5668% -9 - C4 -3RJL - ROCA_BACLD -
2 PsiBlast_PDB 83.4968% -8 - C4 -3RJL - ROCA_BACLD -
3 PsiBlast_PDB 74.2048% 11 - C4 -2BHP 6.7 ?
10 PsiBlast_PDB 73.9748% 11 - C4 -2EIT 7.6 ?
41 PsiBlast_CBE 73.9448% 13 - C4 -2J40 6.4 ?
38 PsiBlast_CBE 73.9148% 9 - C4 -2BHP 6.9 ?
4 PsiBlast_PDB 73.8948% 11 - C4 -2BJK 7.0 ?
36 PsiBlast_CBE 73.8148% 11 - C4 -2BJK 7.2 ?
34 PsiBlast_CBE 73.8148% 11 - C4 -2EHU 7.2 ?
17 PsiBlast_PDB 73.7948% 12 - C4 -2EJD 3.8 ?
15 PsiBlast_PDB 73.7748% 10 - C4 -2BJA 6.0 ?
32 PsiBlast_CBE 73.7048% 10 - C4 -2EIT 6.9 ?
9 PsiBlast_PDB 73.6948% 12 - C4 -2J5N 7.6 ?
11 PsiBlast_PDB 73.6848% 11 - C4 -2EHU 7.3 ?
14 PsiBlast_PDB 73.6448% 11 - C4 -2EIW 3.4 ?
29 PsiBlast_CBE 73.6248% 12 - C4 -2J5N 7.3 ?
30 PsiBlast_CBE 73.6048% 12 - C4 -2IY6 3.5 ?
18 PsiBlast_PDB 73.5948% 11 - C4 -2EJL 3.9 ?
8 PsiBlast_PDB 73.5548% 12 - C4 -2BHQ 3.7 ?
5 PsiBlast_PDB 73.5548% 12 - C4 -2IY6 3.4 ?
37 PsiBlast_CBE 73.4948% 10 - C4 -2BHQ 3.7 ?
12 PsiBlast_PDB 73.4548% 11 - C4 -2EII 7.0 ?
6 PsiBlast_PDB 73.4448% 12 - C4 -2EHQ 7.5 ?
39 PsiBlast_CBE 73.3848% 12 - C4 -2EIW 3.0 ?
42 PsiBlast_CBE 73.3548% 11 - C4 -2EJL 3.7 ?
16 PsiBlast_PDB 73.2148% 15 - C4 -2J40 7.4 ?
44 PsiBlast_CBE 73.0548% 10 - C4 -2BJA 5.9 ?
33 PsiBlast_CBE 73.0148% 12 - C4 -2EII 7.0 ?
35 PsiBlast_CBE 72.9548% 12 - C4 -2EHQ 7.5 ?
43 PsiBlast_CBE 72.7948% 13 - C4 -2EJD 3.8 ?
31 PsiBlast_CBE 72.7348% 13 - C4 -2EJ6 2.7 ?
7 PsiBlast_PDB 72.6448% 11 - C4 -2EJ6 3.6 ?
118 HHSearch 64.0030% 8 - C4 -4E3X 3.1 AL4A1_MOUSE