@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37830: (2016-08-03 )
MAKSYLITGGAGFIGLTFTKLMLRETDARITVLDKLTYASHPEEMEKLKQNSRFRFVKGDISVQEDIDRAFDETYDGVIHFAAESHVDRSISQAEPFITTNVMGTYRLAEAVLKGKAKKLIHISTDEVYGDLKADDPAFTETTPLSPNNPYSASKASSDLLVLSYVKTHKLPAIITRCSNNYGPYQHSEKMIPTIIRHAKQGLPVPLYGDGLQIRDWLFAEDHCRAIKLILEKGTDGEVYNIGGGNERTNKELASVILKHLGCEELFAHVEDRKGHDRRYAINASKLKNELGWRQEVTFEEGIARTIQWYTDNDR

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_E_5(1KEU)
RMLB_SALTY
[Raw transfer]




NAD_F_6(1KET)
RMLB_STRMU
[Raw transfer]




NAD_E_5(1KET)
RMLB_STRMU
[Raw transfer]




NAD_F_6(1KEU)
RMLB_SALTY
[Raw transfer]




DAU_C_3(1KEU)
RMLB_SALTY
[Raw transfer]




NAD_H_8(1KER)
?
[Raw transfer]




NAD_A_4(1OC2)
?
[Raw transfer]




NAD_C_3(2HUN)
?
[Raw transfer]




NAD_D_4(2HUN)
?
[Raw transfer]




NAD_A_2(1R6D)
?
[Raw transfer]




NAD_C_3(2HUN)
?
[Raw transfer]




NAD_E_5(1KEW)
RMLB_SALTY
[Raw transfer]




NAD_B_8(1OC2)
?
[Raw transfer]




NAD_G_7(1KEP)
RMLB_STRMU
[Raw transfer]




NAD_E_5(1KEW)
RMLB_SALTY
[Raw transfer]




NAD_A_4(1OC2)
?
[Raw transfer]




NAD_A_2(1R6D)
?
[Raw transfer]




DAU_D_4(1KEU)
RMLB_SALTY
[Raw transfer]




NAD_F_6(1KEP)
RMLB_STRMU
[Raw transfer]




NAD_F_6(1KEW)
RMLB_SALTY
[Raw transfer]




NAD_I_9(1KER)
?
[Raw transfer]




NAD_A_3(1R66)
?
[Raw transfer]




NAD_B_4(1BXK)
RMLB2_ECOLI
[Raw transfer]




NAD_A_3(1BXK)
RMLB2_ECOLI
[Raw transfer]




6 PsiBlast_PDB 81.9649% -29 - C1 -1BXK 11.1 RMLB2_ECOLI
27 PsiBlast_CBE 81.6849% -23 - C1 -1BXK 11.5 RMLB2_ECOLI
47 HHSearch 80.8351% 12 - C1 -4EGB - ? -
30 PsiBlast_CBE 79.7045% 11 - C1 -1KER 12.5 ?
29 PsiBlast_CBE 79.7045% 15 - C1 -1KET 12.2 RMLB_STRMU
54 HHSearch 78.5746% 5 - C1 -1R6D 9.1 ?
1 PsiBlast_PDB 78.4250% 14 - C1 -4EGB - ? -
11 PsiBlast_PDB 77.8145% 18 - C1 -1KET 12.3 RMLB_STRMU
28 PsiBlast_CBE 77.7045% 17 - C1 -1OC2 12.0 ?
31 PsiBlast_CBE 77.5945% 19 - C1 -1KEP 12.1 RMLB_STRMU
55 HHSearch 77.5448% 16 - C1 -2HUN 9.7 ?
10 PsiBlast_PDB 77.3645% 17 - C1 -1KER 12.3 ?
12 PsiBlast_PDB 77.2945% 16 - C1 -1OC2 11.7 ?
23 PsiBlast_CBE 77.1747% 2 - C1 -1KEU 12.0 RMLB_SALTY
9 PsiBlast_PDB 76.6345% 19 - C1 -1KEP 12.4 RMLB_STRMU
21 PsiBlast_CBE 76.3348% 16 - C1 -2HUN 10.9 ?
61 HHSearch 76.1949% 7 - C1 -1KEW 12.5 RMLB_SALTY
22 PsiBlast_CBE 76.1947% 4 - C1 -1KEW 12.3 RMLB_SALTY
2 PsiBlast_PDB 75.8448% 15 - C1 -2HUN 9.7 ?
15 PsiBlast_PDB 75.7427% -30 - C1 -1ORR - RFBE_SALTI -
5 PsiBlast_PDB 75.1047% 2 - C1 -1KEW 12.5 RMLB_SALTY
4 PsiBlast_PDB 74.0047% 4 - C1 -1KEU 12.1 RMLB_SALTY
59 HHSearch 73.8447% 25 - C1 -1OC2 10.2 ?
7 PsiBlast_PDB 73.7146% 29 - C1 -1R66 8.7 ?
8 PsiBlast_PDB 73.4645% 31 - C1 -1R6D 9.1 ?