@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37970: (2016-08-03 )
MKQLLQDSWWNQLKEEFEKPYYQELREMLKREYAEQTIYPDSRDIFNALHYTSYDDVKVVILGQDPYHGPGQAQGLSFSVKPGVKQPPSLKNIFLELQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERIDTSKHFIIESTHPSPFSARNGFFGSRPFSRANAYLEKMGEAPIDWCIKDL

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FCF_A_2(3FCF)
UNG_HUMAN
[Raw transfer]




302_B_2(2HXM)
UNG_HUMAN
[Raw transfer]




3FI_A_2(3FCI)
UNG_HUMAN
[Raw transfer]




5NU_A_2(4WS5)
UNG_MYCTU
[Raw transfer]




3FL_B_8(3FCL)
UNG_HUMAN
[Raw transfer]




3FI_A_2(3FCI)
UNG_HUMAN
[Raw transfer]




URA_B_2(5EUG)
UNG_ECOLI
[Raw transfer]




GOL_A_4(3ZOQ)
UNG_BACSU
[Raw transfer]




3FL_A_3(3FCL)
UNG_HUMAN
[Raw transfer]




URA_B_2(2EUG)
UNG_ECOLI
[Raw transfer]




URA_A_2(4WRU)
UNG_MYCTU
[Raw transfer]




URA_A_2(4WPL)
UNG_MYCTU
[Raw transfer]




5NU_A_4(4WS4)
UNG_MYCTU
[Raw transfer]




URF_A_2(4WS0)
UNG_MYCTU
[Raw transfer]




URA_D_4(1UDH)
UNG_HHV11
[Raw transfer]




GOL_B_5(1OKB)
?
[Raw transfer]




URF_A_2(4WS1)
UNG_MYCTU
[Raw transfer]




GOL_A_3(1OKB)
?
[Raw transfer]




GOL_B_2(3EUG)
UNG_ECOLI
[Raw transfer]




GOL_A_8(4WRW)
UNG_MYCTU
[Raw transfer]




URA_A_2(4WRV)
UNG_MYCTU
[Raw transfer]




DUR_A_2(2C53)
UNG_HHV11
[Raw transfer]




5UC_A_2(4WS7)
UNG_MYCTU
[Raw transfer]




6UA_A_2(4WS3)
UNG_MYCTU
[Raw transfer]




FCK_B_2(3FCK)
UNG_HUMAN
[Raw transfer]




URA_B_2(1FLZ)
UNG_ECOLI
[Raw transfer]




URB_A_3(3CXM)
?
[Raw transfer]




URB_A_3(3CXM)
?
[Raw transfer]




TUL_A_2(4WS8)
UNG_MYCTU
[Raw transfer]




NACID_B_2(4UQM)
UNG_DEIRA
[Raw transfer]

-

NACID_B_2(4UQM)
UNG_DEIRA
[Raw transfer]

-

CHAIN_B_1(2OYT)
UNG_HUMAN
[Raw transfer]

-

CIT_A_2(4WRY)
UNG_MYCTU
[Raw transfer]




CIT_A_2(4WPK)
UNG_MYCTU
[Raw transfer]




FLC_A_2(3A7N)
UNG_MYCTU
[Raw transfer]




CIT_A_2(4WPK)
UNG_MYCTU
[Raw transfer]




CIT_A_3(4WS4)
UNG_MYCTU
[Raw transfer]




CIT_A_3(4WS2)
UNG_MYCTU
[Raw transfer]




NACID_D_1(1LAU)
UNG_HHV11
[Raw transfer]

-

CIT_A_2(4WRZ)
UNG_MYCTU
[Raw transfer]




NACID_A_1(2SSP)
UNG_HUMAN
[Raw transfer]

-

CIT_A_4(4WS6)
UNG_MYCTU
[Raw transfer]




NACID_B_1(1EMJ)
UNG_HUMAN
[Raw transfer]

-

NACID_A_1(1SSP)
UNG_HUMAN
[Raw transfer]

-

CHAIN_C_3(3UF7)
UNG_ECOLI
[Raw transfer]

-

NACID_C_2(1EMH)
UNG_HUMAN
[Raw transfer]

-

NACID_B_2(4SKN)
UNG_HUMAN
[Raw transfer]

-

CHAIN_C_3(3UF7)
UNG_ECOLI
[Raw transfer]

-

NACID_B_1(2OXM)
UNG_HUMAN
[Raw transfer]

-

NACID_B_1(1EMH)
UNG_HUMAN
[Raw transfer]

-

NACID_B_1(1Q3F)
UNG_HUMAN
[Raw transfer]

-

2 PsiBlast_PDB 92.09100%-100 - C7 -3ZOR - UNG_BACSU -
69 HHSearch 91.11100% -98 - C7 -3ZOQ 2.7 UNG_BACSU
1 PsiBlast_PDB 91.11100% -98 - C7 -3ZOQ - UNG_BACSU -
70 HHSearch 75.9052% -95 - C7 -3WDF - UNG_STAAR -
4 PsiBlast_PDB 70.2257% -26 - C7 -2BOO - UNG_DEIRA -
3 PsiBlast_PDB 70.1857% -27 - C7 -3UFM - UNG_DEIRA -
72 HHSearch 68.3356% -20 - C7 -4UQM 6.2 UNG_DEIRA
5 PsiBlast_PDB 68.2556% -23 - C7 -4UQM 6.3 UNG_DEIRA
23 PsiBlast_CBE 66.5749% -26 - C7 -1OKB 3.1 ?
71 HHSearch 66.4549% -26 - C7 -3FCI 6.3 UNG_HUMAN
24 PsiBlast_CBE 66.3349% -27 - C7 -1OKB 3.2 ?
33 PsiBlast_CBE 66.2349% -27 - C7 -1SSP 4.3 UNG_HUMAN
6 PsiBlast_PDB 65.9153% -14 - C7 -3WDF - UNG_STAAR -
26 PsiBlast_CBE 65.8849% -24 - C7 -3FCL 5.8 UNG_HUMAN
37 PsiBlast_CBE 65.7249% -23 - C7 -2SSP 5.3 UNG_HUMAN
7 PsiBlast_PDB 65.7053% -14 - C7 -3WDG - UNG_STAAR -
27 PsiBlast_CBE 65.5549% -26 - C7 -3FCK 4.4 UNG_HUMAN
28 PsiBlast_CBE 65.2049% -24 - C7 -3FCI 6.3 UNG_HUMAN
47 PsiBlast_CBE 64.7945% -14 - C7 -4WS1 3.2 UNG_MYCTU
29 PsiBlast_CBE 64.7249% -22 - C7 -3FCF 7.0 UNG_HUMAN
34 PsiBlast_CBE 64.6549% -22 - C7 -1Q3F 6.1 UNG_HUMAN
60 PsiBlast_CBE 64.6440% -36 - C7 -1UDH 3.5 UNG_HHV11
35 PsiBlast_CBE 64.6249% -24 - C7 -1EMJ 5.4 UNG_HUMAN
48 PsiBlast_CBE 64.5545% -12 - C7 -4WS0 2.6 UNG_MYCTU
54 PsiBlast_CBE 64.5245% -14 - C7 -4WRU 3.4 UNG_MYCTU
30 PsiBlast_CBE 64.3949% -21 - C7 -2OYT 6.5 UNG_HUMAN
57 PsiBlast_CBE 64.3045% -13 - C7 -3A7N 3.2 UNG_MYCTU
36 PsiBlast_CBE 64.2649% -23 - C7 -1EMH 6.9 UNG_HUMAN
32 PsiBlast_CBE 64.1749% -21 - C7 -2HXM 7.2 UNG_HUMAN
25 PsiBlast_CBE 64.0949% -22 - C7 -3FCL 5.9 UNG_HUMAN
66 PsiBlast_CBE 64.0439% -31 - C7 -2C53 3.9 UNG_HHV11
62 PsiBlast_CBE 63.9140% -33 - C7 -1LAU 5.1 UNG_HHV11
53 PsiBlast_CBE 63.9145% -16 - C7 -4WRV 3.5 UNG_MYCTU
45 PsiBlast_CBE 63.7545% -17 - C7 -4WS3 3.6 UNG_MYCTU
38 PsiBlast_CBE 63.4448% -20 - C7 -4SKN 3.8 UNG_HUMAN
52 PsiBlast_CBE 63.3845% -12 - C7 -4WRW 2.5 UNG_MYCTU
41 PsiBlast_CBE 63.3645% -8 - C7 -4WS7 3.3 UNG_MYCTU
40 PsiBlast_CBE 63.2945% -14 - C7 -4WS8 3.1 UNG_MYCTU
75 HHSearch 63.0845% -7 - C7 -4WPK 2.4 UNG_MYCTU
50 PsiBlast_CBE 62.9445% -9 - C7 -4WRY 2.4 UNG_MYCTU
43 PsiBlast_CBE 62.7545% -8 - C7 -4WS5 3.9 UNG_MYCTU
42 PsiBlast_CBE 62.7045% -7 - C7 -4WS6 3.3 UNG_MYCTU
55 PsiBlast_CBE 62.4045% -7 - C7 -4WPL 3.3 UNG_MYCTU
49 PsiBlast_CBE 62.1245% -7 - C7 -4WRZ 2.4 UNG_MYCTU
31 PsiBlast_CBE 62.1249% -20 - C7 -2OXM 5.6 UNG_HUMAN
44 PsiBlast_CBE 62.1145% -6 - C7 -4WS4 3.9 UNG_MYCTU
56 PsiBlast_CBE 61.9145% -6 - C7 -4WPK 2.4 UNG_MYCTU
46 PsiBlast_CBE 61.9145% -8 - C7 -4WS2 2.3 UNG_MYCTU
8 PsiBlast_PDB 61.8953% -5 - C7 -3UF7 5.2 UNG_ECOLI
68 HHSearch 61.6352% -3 - C7 -3UF7 5.2 UNG_ECOLI
21 PsiBlast_CBE 61.6053% 1 - C7 -5EUG 3.3 UNG_ECOLI
16 PsiBlast_PDB 61.3853% -6 - C7 -2EUG 3.3 UNG_ECOLI
17 PsiBlast_PDB 61.3453% -6 - C7 -3EUG 2.6 UNG_ECOLI
18 PsiBlast_PDB 60.0753% -7 - C7 -1FLZ 3.6 UNG_ECOLI
39 PsiBlast_CBE 57.3648% -20 - C7 -3CXM 3.3 ?
73 HHSearch 54.1143% 24 - C7 -3CXM 3.3 ?