@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu38300: (2016-08-03 )
MDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEWATIERVTVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_11(1ESQ)
THIM_BACSU
[Raw transfer]




ATP_C_13(1ESQ)
THIM_BACSU
[Raw transfer]




ATP_B_12(1ESQ)
THIM_BACSU
[Raw transfer]




TZE_A_5(1C3Q)
THIM_BACSU
[Raw transfer]




TZE_A_6(1C3Q)
THIM_BACSU
[Raw transfer]




TZE_A_6(1C3Q)
THIM_BACSU
[Raw transfer]




TZE_B_7(1C3Q)
THIM_BACSU
[Raw transfer]




25 PsiBlast_CBE 86.3599%-142 - C5 -1ESJ - THIM_BACSU -
21 PsiBlast_CBE 85.79100%-141 - C5 -1C3Q 3.1 THIM_BACSU
3 PsiBlast_PDB 85.4499%-134 - C5 -1ESJ - THIM_BACSU -
48 Fugue 85.31100%-137 - C5 -1C3Q 2.9 THIM_BACSU
1 PsiBlast_PDB 85.31100%-137 - C5 -1C3Q 2.9 THIM_BACSU
22 PsiBlast_CBE 84.31100%-133 - C5 -1C3Q 3.1 THIM_BACSU
23 PsiBlast_CBE 78.8899%-138 - C5 -1ESQ 5.4 THIM_BACSU
4 PsiBlast_PDB 78.6699%-147 - C5 -1ESQ 5.8 THIM_BACSU
24 PsiBlast_CBE 78.5599%-137 - C5 -1ESQ 5.7 THIM_BACSU
56 HHSearch 77.40100%-140 - C5 -1EKQ - THIM_BACSU -
2 PsiBlast_PDB 77.2099%-140 - C5 -1EKQ - THIM_BACSU -
36 PsiBlast_CBE 58.9538%-117 - C5 -5CGE - ? -
5 PsiBlast_PDB 58.8343%-120 - C5 -3HPD - THIM_PYRHO -
60 HHSearch 58.7843% -92 * C5 *3HPD - THIM_PYRHO -
35 PsiBlast_CBE 58.5038%-121 - C5 -5COJ - ? -
40 PsiBlast_CBE 58.2838%-114 - C5 -5CGE - ? -
30 PsiBlast_CBE 58.1638%-121 - C5 -5CGA - ? -
28 PsiBlast_CBE 58.0838%-123 - C5 -5CGA - ? -
29 PsiBlast_CBE 58.0038%-117 - C5 -5CGA - ? -
34 PsiBlast_CBE 57.9338%-121 - C5 -5COJ - ? -