@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu38630: (2016-08-04 )
MKDDHQNKQHQSNAQGSEEAFSHKTSGKNESEDTLTNRQGHPVTDNQNVRTVGNRGPTTLENYDFLEKISHFDRERIPERVVHARGAGAHGYFEAYGSFGDEPISTYTRAKLFQEKGKKTPAFVRFSTVNHGKHSPETLRDPRGFAVKLYTEDGNWDLVGNNLKIFFIRDPLKFPDLVHAFQPDPVTNIQDGERIFDFISQSPEATHMITFLFSPWGIPANYRQMQGSGVHAYKWVNEEGKAVLVKYHFEPKQGIRNLTQKEAEEIQGKNFNHATQDLYDAIENGDYPEWEVYAQIMSDDEHPELDFDPLDPTKLWYKDDFPWKPIGKLVLNKNPENYHAEVEQASFGTGVLVDGLDFSDDKLLQGRTFAYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQYRVDRAEGQNPHVNYEPSIMGGLKEAKQDGKDHTPHVEGDVKREAIDRTNNFGQAGETYRRFTEFERNELITNLVNTLSTCRKEIQDQMIENFTKADPDYGKRVAEGLKKVSENNSNGPIGTTETEQAAKQAEQESHPSDPY

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_3(8CAT)
CATA_BOVIN
[Raw transfer]



HEM_A_3(7CAT)
CATA_BOVIN
[Raw transfer]



HEM_A_3(8CAT)
CATA_BOVIN
[Raw transfer]



HEM_B_5(7CAT)
CATA_BOVIN
[Raw transfer]



HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]



HEM_B_5(8CAT)
CATA_BOVIN
[Raw transfer]



HEM_A_2(1GWE)
CATA_MICLU
[Raw transfer]
21 PsiBlast_CBE 96.6968% -24 - C8 -4CAB - CATA_DEIRA -
22 PsiBlast_CBE 96.4468% -23 - C8 -4CAB - CATA_DEIRA -
1 PsiBlast_PDB 95.4668% -22 - C8 -4CAB - CATA_DEIRA -
23 PsiBlast_CBE 95.3368% -21 - C8 -4CAB - CATA_DEIRA -
101 HHSearch 94.1369% -2 - C8 -4CAB - CATA_DEIRA -
110 HHSearch 88.8754% -14 - C8 -4QOL - ? -
104 HHSearch 88.3844% -19 - C8 -1DGF - CATA_HUMAN -
3 PsiBlast_PDB 87.9253% -13 - C8 -4QOM - ? -
4 PsiBlast_PDB 87.8353% -12 - C8 -4QON - ? -
34 PsiBlast_CBE 87.8253% -10 - C8 -4QOO - ? -
5 PsiBlast_PDB 87.7753% -12 - C8 -4QOO - ? -
28 PsiBlast_CBE 87.7453% -11 - C8 -4QOQ - ? -
6 PsiBlast_PDB 87.7153% -12 - C8 -4QOP - ? -
38 PsiBlast_CBE 87.7053% -10 - C8 -4QON - ? -
35 PsiBlast_CBE 87.6453% -12 - C8 -4QOO - ? -
25 PsiBlast_CBE 87.6253% -11 - C8 -4QOR - ? -
2 PsiBlast_PDB 87.6053% -11 - C8 -4QOL - ? -
8 PsiBlast_PDB 87.5653% -10 - C8 -4QOR - ? -
39 PsiBlast_CBE 87.5353% -11 - C8 -4QOM - ? -
37 PsiBlast_CBE 87.5253% -10 - C8 -4QON - ? -
107 HHSearch 84.4143% -7 - C8 -1QWL 12.9 CATA_HELPY
82 PsiBlast_CBE 82.6743% -3 - C8 -7CAT 11.8 CATA_BOVIN
81 PsiBlast_CBE 82.3543% -3 - C8 -7CAT 11.8 CATA_BOVIN
79 PsiBlast_CBE 82.0043% -1 - C8 -8CAT 12.0 CATA_BOVIN
80 PsiBlast_CBE 80.3143% 2 - C8 -8CAT 11.7 CATA_BOVIN
102 HHSearch 78.6638% -4 - C8 -1GWE 12.6 CATA_MICLU
121 Fugue 76.5844% 19 - C8 -8CAT 11.7 CATA_BOVIN