@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu38720: (2016-08-04 )
MNVPFWTEEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYPKREGPVILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRFE

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BA3_A_3(3RQQ)
NNRD_BACSU
[Raw transfer]




ATP_A_6(3RTG)
NNR_THEMA
[Raw transfer]




APR_A_3(3RQ6)
NNRD_BACSU
[Raw transfer]




AP5_A_3(3RQ8)
NNRD_BACSU
[Raw transfer]




B4P_A_3(3RQX)
NNRD_BACSU
[Raw transfer]




B6P_A_3(3RQH)
NNRD_BACSU
[Raw transfer]




ATP_A_6(3RRF)
NNR_THEMA
[Raw transfer]




ATP_A_6(3RTE)
NNR_THEMA
[Raw transfer]




ATP_A_6(3RTC)
NNR_THEMA
[Raw transfer]




ADP_A_5(3RRE)
NNR_THEMA
[Raw transfer]




ADP_A_6(3RTD)
NNR_THEMA
[Raw transfer]




APR_A_6(3RS8)
NNR_THEMA
[Raw transfer]




BA3_A_6(3RS9)
NNR_THEMA
[Raw transfer]




ATP_A_6(3RU3)
NNR_THEMA
[Raw transfer]




ADQ_A_6(3RT7)
NNR_THEMA
[Raw transfer]




APR_A_6(3RSG)
NNR_THEMA
[Raw transfer]




AMP_A_4(3RRB)
NNR_THEMA
[Raw transfer]




COA_A_2(3RQ5)
NNRD_BACSU
[Raw transfer]




NPW_A_4(3RPZ)
NNRD_BACSU
[Raw transfer]




NPW_A_4(3RPZ)
NNRD_BACSU
[Raw transfer]




NAX_A_4(3RQ2)
NNRD_BACSU
[Raw transfer]




NPW_A_7(3RU3)
NNR_THEMA
[Raw transfer]




NAX_A_7(3RTD)
NNR_THEMA
[Raw transfer]




NPW_A_5(3RU2)
NNR_THEMA
[Raw transfer]




EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]




NAX_A_5(3RSQ)
NNR_THEMA
[Raw transfer]




AMP_A_5(3RPH)
NNRD_BACSU
[Raw transfer]




NAD_A_7(3RSG)
NNR_THEMA
[Raw transfer]




ADP_A_7(3RRE)
NNR_THEMA
[Raw transfer]




AMP_A_5(3RRB)
NNR_THEMA
[Raw transfer]




A3P_A_4(3RTB)
NNR_THEMA
[Raw transfer]




9 PsiBlast_PDB 99.52100%-139 - C2 -3RQX 9.3 NNRD_BACSU
3 PsiBlast_PDB 99.45100%-141 - C2 -3RQ2 5.6 NNRD_BACSU
8 PsiBlast_PDB 99.29100%-137 - C2 -3RQQ 6.9 NNRD_BACSU
2 PsiBlast_PDB 99.28100%-139 - C2 -3RPZ 5.6 NNRD_BACSU
5 PsiBlast_PDB 99.10100%-136 - C2 -3RQ6 7.2 NNRD_BACSU
7 PsiBlast_PDB 99.07100%-139 - C2 -3RQH 6.4 NNRD_BACSU
6 PsiBlast_PDB 99.06100%-141 - C2 -3RQ8 7.3 NNRD_BACSU
1 PsiBlast_PDB 98.48100%-138 - C2 -3RPH 3.2 NNRD_BACSU
4 PsiBlast_PDB 96.95100%-141 - C2 -3RQ5 3.5 NNRD_BACSU
10 PsiBlast_PDB 96.4898%-141 - C2 -1KYH - NNRD_BACSU -
32 HHSearch 83.6897% -51 - C2 -3RPZ 5.6 NNRD_BACSU
54 Fugue 72.9392% 1 - C2 -1KYH - NNRD_BACSU -
18 PsiBlast_PDB 57.1136% -2 - C2 -3RTA - NNR_THEMA -
31 HHSearch 56.6926% -52 * C2 *2R3B 3.3 NNRD_ENTFA
25 PsiBlast_CBE 56.6136% -3 - C2 -3RTB 3.5 NNR_THEMA
21 PsiBlast_CBE 56.5536% -5 - C2 -3RU3 5.5 NNR_THEMA
22 PsiBlast_CBE 56.4536% -1 - C2 -3RU2 5.2 NNR_THEMA
24 PsiBlast_CBE 56.4036% -3 - C2 -3RTE 6.4 NNR_THEMA
15 PsiBlast_PDB 56.3936% -4 - C2 -3RSS - NNR_THEMA -
28 PsiBlast_CBE 56.3736% -2 - C2 -3RRF 6.0 NNR_THEMA
16 PsiBlast_PDB 56.3736% -1 - C2 -3RT7 4.8 NNR_THEMA
19 PsiBlast_PDB 56.3236% -2 - C2 -3RTC 6.1 NNR_THEMA
23 PsiBlast_CBE 56.3036% -1 - C2 -3RTG 5.9 NNR_THEMA
26 PsiBlast_CBE 55.9536% -0 - C2 -3RSG 5.7 NNR_THEMA
20 PsiBlast_PDB 55.7336% -2 - C2 -3RTD 5.2 NNR_THEMA
14 PsiBlast_PDB 55.7136% -1 - C2 -3RSQ 4.4 NNR_THEMA
30 PsiBlast_CBE 55.6436% -2 - C2 -3RRB 3.8 NNR_THEMA
11 PsiBlast_PDB 55.5536% -1 - C2 -3RS8 5.6 NNR_THEMA
12 PsiBlast_PDB 55.5236% -1 - C2 -3RS9 5.5 NNR_THEMA
29 PsiBlast_CBE 55.1436% -0 - C2 -3RRE 4.7 NNR_THEMA