@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu39360: (2016-08-05 )
MTDVKKSIRANRGTELECLGWEQEAVLRMLRNNLDPEVAEKPEDLIVYGGIGKAARDWDAFHAIEHSLKTLKNDETLLVQSGKPVGMFRTHPQAPRVLLANSVLVPKWADWEHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGMGGAQPLSVTMNEGVVIAVEVDEKRIDKRIETKYCDRKTASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVTDQTSAHDPLIGYVPEGYSLDEADRLRQDTPELYVRLAKQSMKKHVEAMLAFQQKGSIVFDYGNNIRQVAKDEGLENAFDFPGFVPAYIRPLFCEGKGPFRWAALSGDPADIYRTDALLKELFPTNKALHRWIDMAQEKVTFQGLPSRICWLGYGERKKMGLAINELVRTGELKAPVVIGRDHLDCGSVASPNRETEAMKDGSDAVGDWAVLNALVNTAAGASWVSFHHGGGVGMGYSLHAGMVAVADGSELADERLARVLTSDPGMGIIRHADAGYERAVEVAKEQDIIVPMQK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_3(1UWL)
HUTU_PSEPU
[Raw transfer]




NAD_B_5(1W1U)
HUTU_PSEPU
[Raw transfer]




NAD_A_3(1W1U)
HUTU_PSEPU
[Raw transfer]




NAD_B_4(1UWL)
HUTU_PSEPU
[Raw transfer]




NAD_A_3(1UWK)
HUTU_PSEPU
[Raw transfer]




NAD_A_3(1UWK)
HUTU_PSEPU
[Raw transfer]




NAD_B_5(1UWK)
HUTU_PSEPU
[Raw transfer]




8 PsiBlast_CBE 94.26100% -62 - C4 -2FKN - HUTU_BACSU -
9 PsiBlast_CBE 94.07100% -60 - C4 -2FKN - HUTU_BACSU -
17 HHSearch 93.89100% -62 - C4 -2FKN - HUTU_BACSU -
1 PsiBlast_PDB 93.89100% -62 - C4 -2FKN - HUTU_BACSU -
10 PsiBlast_CBE 93.77100% -65 - C4 -2FKN - HUTU_BACSU -
11 PsiBlast_CBE 82.5564% -65 - C4 -1UWL 13.0 HUTU_PSEPU
3 PsiBlast_PDB 82.0064% -62 - C4 -1W1U 13.2 HUTU_PSEPU
19 HHSearch 81.8663% -61 - C4 -1UWK 12.5 HUTU_PSEPU
12 PsiBlast_CBE 81.7364% -63 - C4 -1W1U 12.9 HUTU_PSEPU
2 PsiBlast_PDB 81.7164% -60 - C4 -1UWL 13.3 HUTU_PSEPU
38 Fugue 75.5963% -2 - C4 -1UWK - HUTU_PSEPU -
14 PsiBlast_CBE 75.1163% 10 - C4 -2V7G - HUTU_PSEPU -
5 PsiBlast_PDB 74.6963% 16 - C4 -2V7G - HUTU_PSEPU -
16 PsiBlast_CBE 74.6763% 15 - C4 -2V7G - HUTU_PSEPU -
15 PsiBlast_CBE 74.4463% 11 - C4 -2V7G - HUTU_PSEPU -
13 PsiBlast_CBE 74.2963% 16 - C4 -1UWK 9.2 HUTU_PSEPU
4 PsiBlast_PDB 73.9263% 16 - C4 -1UWK 10.5 HUTU_PSEPU
22 HHSearch 35.8516% -91 - C4 -3D64 - SAHH_BURP1 -
23 HHSearch 34.9513%-101 - C4 -3GVP - SAHH3_HUMAN -
25 HHSearch 34.4715%-111 - C4 -1V8B - SAHH_PLAF7 -