@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu39370: (2016-08-05 )
MPKQIDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYEADEIIDCSGRLVTPGLVDPHTHLVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQLRVAKKLHESQPVDLVSTFMGAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFTETGVFTVSQSRRYLQKAAEAGFGLKIHADEIDPLGGAELAGKLKAVSADHLVGTSDEGIKKLAEAGTIAVLLPGTTFYLGKSTYARARAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQAPNYMYIPYHYGVNHVHQVMKNGTIVVNREGAILG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IZC_B_6(2G3F)
HUTI_BACSU
[Raw transfer]



IZC_A_5(2G3F)
HUTI_BACSU
[Raw transfer]



NIG_B_7(2PUZ)
HUTI_AGRFC
[Raw transfer]



DI6_A_3(2Q09)
HUTI_AERHH
[Raw transfer]
21 PsiBlast_CBE 77.40100% -85 - C2 -2G3F 3.1 HUTI_BACSU
158 Fugue 77.13100% -88 - C2 -2G3F 3.1 HUTI_BACSU
2 PsiBlast_PDB 77.13100% -88 - C2 -2G3F - HUTI_BACSU -
1 PsiBlast_PDB 76.78100% -89 - C2 -2BB0 - HUTI_BACSU -
22 PsiBlast_CBE 76.49100% -87 - C2 -2BB0 - HUTI_BACSU -
137 HHSearch 72.1597% -6 - C2 -2BB0 - HUTI_BACSU -
159 Fugue 54.7541% -5 - C2 -2GOK - HUTI_AGRFC -
139 HHSearch 54.1041% -5 - C2 -2PUZ - HUTI_AGRFC -
24 PsiBlast_CBE 53.2642% 1 - C2 -2GOK - HUTI_AGRFC -
23 PsiBlast_CBE 53.1242% 2 - C2 -2PUZ 2.8 HUTI_AGRFC
4 PsiBlast_PDB 52.5342% 3 - C2 -2GOK - HUTI_AGRFC -
3 PsiBlast_PDB 52.5242% 3 - C2 -2PUZ - HUTI_AGRFC -
138 HHSearch 51.1935% -21 - C2 -2Q09 3.7 HUTI_AERHH
6 PsiBlast_PDB 48.8737% -14 - C2 -2Q09 - HUTI_AERHH -
5 PsiBlast_PDB 48.8537% -13 - C2 -2OOF - HUTI_AERHH -
149 HHSearch 42.8520% -5 - C2 -4V1X - ATZA_PSESD -
146 HHSearch 42.3817% 18 - C2 -4AQL - GUAD_HUMAN -
151 HHSearch 41.3419% -40 - C2 -4F0R - ? -
19 PsiBlast_PDB 40.1220% -41 - C2 -4F0S - ? -
18 PsiBlast_PDB 40.0720% -38 - C2 -4F0R - ? -