@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu39540: (2016-08-05 )
MCTSLTLETADRKHVLARTMDFAFQLGTEVILYPRRYSWNSEADGRAHQTQYAFIGMGRKLGNILFADGINESGLSCAALYFPGYAEYEKTIREDTVHIVPHEFVTWVLSVCQSLEDVKEKIRSLTIVEKKLDLLDTVLPLHWILSDRTGRNLTIEPRADGLKVYDNQPGVMTNSPDFIWHVTNLQQYTGIRPKQLESKEMGGLALSAFGQGLGTVGLPGDYTPPSRFVRAVYLKEHLEPAADETKGVTAAFQILANMTIPKGAVITEEDEIHYTQYTSVMCNETGNYYFHHYDNRQIQKVNLFHEDLDCLEPKVFSAKAEESIHELN

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PNV_A_3(2Z71)
PAC_LYSSH
[Raw transfer]




PNV_C_4(2Z71)
PAC_LYSSH
[Raw transfer]




GOL_A_3(2RF8)
CBH_CLOPE
[Raw transfer]




GOL_B_5(2RF8)
CBH_CLOPE
[Raw transfer]




GOL_A_8(2RG2)
CBH_CLOPE
[Raw transfer]




EDO_A_5(2BJG)
CBH_CLOPE
[Raw transfer]




GLY_A_5(2RLC)
CBH_CLOPE
[Raw transfer]




TAU_A_3(2BJF)
CBH_CLOPE
[Raw transfer]




TAU_A_3(2BJF)
CBH_CLOPE
[Raw transfer]




EDO_A_5(2RG2)
CBH_CLOPE
[Raw transfer]




EDO_A_7(2BJG)
CBH_CLOPE
[Raw transfer]




1 PsiBlast_PDB 83.12100% -95 - C6 -2OQC - YXEI_BACSU -
37 HHSearch 79.2899% -38 - C6 -2OQC - YXEI_BACSU -
28 PsiBlast_CBE 62.9840% -12 - C6 -2QUY - PAC_LYSSH -
27 PsiBlast_CBE 62.7540% -13 - C6 -2QUY - PAC_LYSSH -
54 Fugue 62.6240% -10 - C6 -3PVA - PAC_LYSSH -
3 PsiBlast_PDB 62.4739% -38 - C6 -2BJF 3.2 CBH_CLOPE
5 PsiBlast_PDB 62.4240% -10 - C6 -2QUY - PAC_LYSSH -
25 PsiBlast_CBE 62.2940% -11 - C6 -2QUY - PAC_LYSSH -
9 PsiBlast_PDB 62.2638% -35 - C6 -2RF8 2.2 CBH_CLOPE
22 PsiBlast_CBE 62.2540% -11 - C6 -2QUY - PAC_LYSSH -
24 PsiBlast_CBE 62.1940% -10 - C6 -2QUY - PAC_LYSSH -
30 PsiBlast_CBE 62.0338% -37 - C6 -2RF8 2.8 CBH_CLOPE
26 PsiBlast_CBE 61.8840% -10 - C6 -2QUY - PAC_LYSSH -
6 PsiBlast_PDB 61.8040% -6 - C6 -2IWM - PAC_LYSSH -
7 PsiBlast_PDB 61.7640% -5 - C6 -3MJI - PAC_LYSSH -
4 PsiBlast_PDB 61.7439% -33 - C6 -2BJG 2.8 CBH_CLOPE
23 PsiBlast_CBE 61.6140% -9 - C6 -2QUY - PAC_LYSSH -
2 PsiBlast_PDB 61.5740% -10 - C6 -3PVA - PAC_LYSSH -
21 PsiBlast_CBE 61.4039% -34 - C6 -2BJG 2.8 CBH_CLOPE
29 PsiBlast_CBE 61.3340% -6 - C6 -2Z71 3.2 PAC_LYSSH
8 PsiBlast_PDB 61.1040% -7 - C6 -2Z71 2.8 PAC_LYSSH
11 PsiBlast_PDB 61.0938% -36 - C6 -2RG2 3.2 CBH_CLOPE
36 HHSearch 60.5040% -17 - C6 -2BJF 3.2 CBH_CLOPE
12 PsiBlast_PDB 52.4237% -83 - C6 -2RLC 2.8 CBH_CLOPE