@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu39640: (2016-08-05 )
MANMLEVKHINKTYKGQVSYQALKQISFSIEEGEFTAVMGPSGSGKTTLLNIISTIDRPDSGDILINGENPHRLKRTKLAHFRRKQLGFVFQDFNLLDTLTIGENIMLPLTLEKEAPSVMEEKLHGIAAKLGIENLLNKRTFEVSGGQRQRAAIARAVIHKPSLILADEPTGNLDSKATKDVMETLQSLNRDDHVTALMVTHDPVSASYCRRVIFIKDGELFNEIYRGENRQVFYEQILDVLSMLGGNANDLSSVRL

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_B_8(1MV5)
LMRA_LACLA
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




AGS_B_4(4S0F)
?
[Raw transfer]




23 PsiBlast_CBE 87.1638% -97 - C1 -2PCJ - LOLD_AQUAE -
4 PsiBlast_PDB 86.7838% -95 - C1 -2PCJ - LOLD_AQUAE -
5 PsiBlast_PDB 84.3338% -97 - C1 -2PCL - LOLD_AQUAE -
106 Fugue 81.4530% -83 - C1 -1Z47 - ? -
6 PsiBlast_PDB 80.9334% -91 - C1 -2IT1 - ? -
24 PsiBlast_CBE 79.7634% -93 - C1 -2IT1 - ? -
102 Fugue 78.4432% -96 - C1 -1OXS - ? -
98 PsiBlast_CBE 76.1333%-101 - C1 -3FVQ 7.9 FBPC_NEIG1
2 PsiBlast_PDB 75.5342% 18 - C1 -3TIF - Y796_METJA -
115 HHSearch 74.8436%-103 - C1 -2IT1 - ? -
97 PsiBlast_CBE 74.2033% -99 - C1 -3FVQ 8.1 FBPC_NEIG1
116 HHSearch 73.8032%-101 - C1 -3FVQ 7.9 FBPC_NEIG1
1 PsiBlast_PDB 72.9442% 25 - C1 -1L2T - Y796_METJA -
117 HHSearch 72.8933% -99 - C1 -2YYZ - ? -
92 PsiBlast_CBE 72.0833% -11 - C1 -1B0U 6.0 HISP_SALTY
20 PsiBlast_PDB 72.0130%-104 - C1 -1Z47 - ? -
22 PsiBlast_CBE 71.4042% 24 - C1 -3TIF - Y796_METJA -
126 HHSearch 69.9133%-108 - C1 -1OXX - ? -
21 PsiBlast_CBE 69.4342% 30 - C1 -1L2T - Y796_METJA -
11 PsiBlast_PDB 68.4036% -85 - C1 -2D62 - ? -
91 PsiBlast_CBE 60.8031% -10 - C1 -2HYD 4.2 Y1866_STAAM
88 PsiBlast_CBE 60.1931% -10 - C1 -2ONJ 5.9 Y1866_STAAM
89 PsiBlast_CBE 60.0431% -9 - C1 -2ONJ 5.8 Y1866_STAAM
56 PsiBlast_CBE 59.9134% -59 - C1 -3C41 7.1 ?
90 PsiBlast_CBE 59.9031% -10 - C1 -2HYD 5.5 Y1866_STAAM
55 PsiBlast_CBE 56.0334% -58 - C1 -3C41 6.2 ?
96 PsiBlast_CBE 54.2431% -66 - C1 -1MV5 6.6 LMRA_LACLA
95 PsiBlast_CBE 53.9931% -63 - C1 -1MV5 6.1 LMRA_LACLA
100 PsiBlast_CBE 50.8532% -58 - C1 -4AYX 5.8 ABCBA_HUMAN
82 PsiBlast_CBE 46.0533% -31 - C1 -4S0F 1.9 ?