@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu39700: (2016-08-06 )
MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEPLMIHCAHRNPTVGDNYTTDMAVVDTLVHEIDVLHWLVNDDYESVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEIYVNCKYGYDIQCEIVGEDGIIKLPEPSSISLRKEGRFSTDILMDWQRRFVAAYDVEIQDFIDSIQKKGEVSGPTAWDGYIAAVTTDACVKAQESGQKEKVELKEKPEFYQSFTTVQN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_3(3NT2)
IOLG_BACSU
[Raw transfer]




NAD_B_4(3NTQ)
IOLG_BACSU
[Raw transfer]




NAI_A_3(3NT4)
IOLG_BACSU
[Raw transfer]




NAD_A_3(3NT5)
IOLG_BACSU
[Raw transfer]




NAD_A_3(3NTQ)
IOLG_BACSU
[Raw transfer]




NAD_B_5(3NTR)
IOLG_BACSU
[Raw transfer]




NAI_B_4(3NT2)
IOLG_BACSU
[Raw transfer]




NAI_B_5(3NT4)
IOLG_BACSU
[Raw transfer]




NAD_A_3(3NTR)
IOLG_BACSU
[Raw transfer]




NAI_B_4(3NT5)
IOLG_BACSU
[Raw transfer]




CIT_A_2(4MKZ)
?
[Raw transfer]




INS_B_6(3NTR)
IOLG_BACSU
[Raw transfer]




EPE_A_2(3NTO)
IOLG_BACSU
[Raw transfer]




INS_A_4(3NTR)
IOLG_BACSU
[Raw transfer]




PGE_A_2(3MZ0)
IOLG_BACSU
[Raw transfer]




PGE_A_2(3MZ0)
IOLG_BACSU
[Raw transfer]




27 PsiBlast_CBE 94.9899%-118 - C1 -4L8V - IOLG_BACSU -
28 PsiBlast_CBE 94.7199%-117 - C1 -4L8V - IOLG_BACSU -
60 HHSearch 94.51100%-119 - C1 -3MZ0 2.5 IOLG_BACSU
2 PsiBlast_PDB 93.96100%-117 - C1 -3NT4 8.4 IOLG_BACSU
7 PsiBlast_PDB 93.7198%-120 - C1 -3MZ0 2.5 IOLG_BACSU
8 PsiBlast_PDB 93.5399%-118 - C1 -4L8V - IOLG_BACSU -
4 PsiBlast_PDB 93.4299%-121 - C1 -3NTO 3.0 IOLG_BACSU
22 PsiBlast_CBE 93.02100%-119 - C1 -3NT4 8.8 IOLG_BACSU
26 PsiBlast_CBE 92.9399%-114 - C1 -4L8V - IOLG_BACSU -
1 PsiBlast_PDB 92.60100%-117 - C1 -3NT2 8.9 IOLG_BACSU
25 PsiBlast_CBE 92.5299%-120 - C1 -3NTQ 8.3 IOLG_BACSU
23 PsiBlast_CBE 92.40100%-115 - C1 -3NT2 8.9 IOLG_BACSU
21 PsiBlast_CBE 92.34100%-116 - C1 -3NT5 6.3 IOLG_BACSU
24 PsiBlast_CBE 92.2399%-119 - C1 -3NTR 8.5 IOLG_BACSU
3 PsiBlast_PDB 92.16100%-116 - C1 -3NT5 8.1 IOLG_BACSU
6 PsiBlast_PDB 92.0299%-119 - C1 -3NTR 8.7 IOLG_BACSU
5 PsiBlast_PDB 91.7999%-122 - C1 -3NTQ 8.5 IOLG_BACSU
9 PsiBlast_PDB 91.4199%-118 - C- -4L9R - IOLG_BACSU -
62 HHSearch 80.2350%-127 * C1 *3EC7 - IOLG_SALTY -
10 PsiBlast_PDB 74.8549%-122 - C1 -3EC7 - IOLG_SALTY -