@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu39810: (2016-08-06 )
MKKDTRKYMIYFFGALGGLLYGYDTGVISGALLFINNDIPLTTLTEGLVVSMLLLGAIFGSALSGTCSDRWGRRKVVFVLSIIFIIGALACAFSQTIGMLIASRVILGLAVGGSTALVPVYLSEMAPTKIRGTLGTMNNLMIVTGILLAYIVNYLFTPFEAWRWMVGLAAVPAVLLLIGIAFMPESPRWLVKRGSEEEARRIMNITHDPKDIEMELAEMKQGEAEKKETTLGVLKAKWIRPMLLIGVGLAIFQQAVGINTVIYYAPTIFTKAGLGTSASALGTMGIGILNVIMCITAMILIDRVGRKKLLIWGSVGITLSLAALSGVLLTLGLSASTAWMTVVFLGVYIVFYQATWGPVVWVLMPELFPSKARGAATGFTTLVLSAANLIVSLVFPLMLSAMGIAWVFMVFSVICLLSFFFAFYMVPETKGKSLEEIEASLKKRFKKKKSTQNQVLNERTL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MAL_A_2(4ZWB)
GTR3_HUMAN
[Raw transfer]



MAL_A_5(4ZWC)
GTR3_HUMAN
[Raw transfer]



GLC_A_5(4ZW9)
GTR3_HUMAN
[Raw transfer]



GLC_A_5(4ZW9)
GTR3_HUMAN
[Raw transfer]



XYP_A_2(4GBY)
XYLE_ECOLI
[Raw transfer]



6BG_A_2(4GC0)
XYLE_ECOLI
[Raw transfer]



6BG_A_2(4GC0)
XYLE_ECOLI
[Raw transfer]



6BG_A_2(4GC0)
XYLE_ECOLI
[Raw transfer]
1 PsiBlast_PDB 91.6054%-164 - C1 -4LDS - ? -
32 HHSearch 89.6055%-162 * C1 *4LDS - ? -
22 Fugue 83.6234%-129 - C1 -4GC0 4.1 XYLE_ECOLI
6 PsiBlast_PDB 81.0732%-114 - C1 -4PYP - GTR1_HUMAN -
9 PsiBlast_PDB 79.9130% -99 - C1 -4ZWB 4.5 GTR3_HUMAN
8 PsiBlast_PDB 79.4730% -98 - C1 -4ZW9 4.3 GTR3_HUMAN
33 HHSearch 79.2232% -94 - C1 -4PYP - GTR1_HUMAN -
3 PsiBlast_PDB 78.8233%-118 - C1 -4GBZ - XYLE_ECOLI -
4 PsiBlast_PDB 78.8033%-118 - C1 -4GC0 4.1 XYLE_ECOLI
10 PsiBlast_PDB 78.6530% -98 - C1 -4ZWC 3.7 GTR3_HUMAN
2 PsiBlast_PDB 78.5833%-119 - C1 -4GBY 3.5 XYLE_ECOLI
7 PsiBlast_PDB 77.9530%-102 - C1 -5C65 - GTR3_HUMAN -
23 Fugue 77.6535%-137 - C1 -4QIQ - XYLE_ECOLI -
35 HHSearch 76.0835%-118 - C1 -4GC0 4.1 XYLE_ECOLI
21 PsiBlast_CBE 75.6633% -95 - C1 -4JA3 - XYLE_ECOLI -
34 HHSearch 75.4731% -95 - C1 -4ZW9 4.3 GTR3_HUMAN
20 PsiBlast_CBE 73.5033%-119 - C1 -4JA4 - XYLE_ECOLI -
5 PsiBlast_PDB 72.8633%-118 - C1 -4JA4 - XYLE_ECOLI -
19 PsiBlast_CBE 71.6433%-113 - C1 -4JA4 - XYLE_ECOLI -
36 HHSearch 71.1331%-128 - C1 -4YB9 - GTR5_BOVIN -