@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu40080: (2016-08-06 )
MFNSIGVIGLGVMGSNIALNMANKGENVAVYNYTRDLTDQLIQKLDGQSLSPYYELEDFVQSLEKPRKIFLMVTAGKPVDSVIQSLKPLLEEGDVIMDGGNSHYEDTERRYDELKEKGIGYLGVGISGGEVGALTGPSIMPGGDRDVYEKAAPILTKIAAQVGDDPCCVYIGPKGAGHFTKMVHNGIEYADMQLIAEAYTFLRETLRLPLDEIASIFETWNQGELKSYLIEITAEILRKKDEKTGQPLIDVILDKTGQKGTGKWTSMQAIDNGIPSTIITESLFARYLSSLKEERMAAQDVLAGPEAEEKHLDKDTWIEYVRQALYMGKVCAYAQGFAQYKMSSELYGWNLPLKDIALIFRGGCIIRADFLNVISEAFSEQPNLANLLIAPYFTDKLHAYQTGLRKVVCEGISTGISFPCLTTALSYYDGYRTGRSNANLLQAQRDYFGAHTYERTDMDGVFHTNWSE

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6PG_A_2(2IYO)
6PGD_LACLM
[Raw transfer]




6PG_A_3(2ZYA)
6PGD_ECOLI
[Raw transfer]




6PG_B_5(3FWN)
6PGD_ECOLI
[Raw transfer]




6PG_B_4(2ZYA)
6PGD_ECOLI
[Raw transfer]




6PG_C_3(1PGP)
6PGD_SHEEP
[Raw transfer]




6PG_B_7(2W8Z)
?
[Raw transfer]




NDP_G_7(1PGO)
6PGD_SHEEP
[Raw transfer]




GLO_A_3(2ZYD)
6PGD_ECOLI
[Raw transfer]




NBP_A_4(1PGN)
6PGD_SHEEP
[Raw transfer]




ATR_B_4(3FWN)
6PGD_ECOLI
[Raw transfer]




3PG_A_5(4GWK)
6PGD_HUMAN
[Raw transfer]




MES_A_3(4GWG)
6PGD_HUMAN
[Raw transfer]




MES_A_4(4GWK)
6PGD_HUMAN
[Raw transfer]




MES_A_3(4GWG)
6PGD_HUMAN
[Raw transfer]




FLC_E_5(2P4Q)
6PGD1_YEAST
[Raw transfer]




FLC_E_5(2P4Q)
6PGD1_YEAST
[Raw transfer]




TRS_A_4(2W90)
?
[Raw transfer]




22 PsiBlast_CBE 88.4458%-109 - C3 -2W90 2.7 ?
2 PsiBlast_PDB 88.3958%-110 - C3 -2W90 - ? -
1 PsiBlast_PDB 87.9158%-107 - C3 -2W8Z - ? -
21 PsiBlast_CBE 87.7458%-108 - C3 -2W8Z 2.7 ?
77 HHSearch 83.9355% -64 - C3 -2ZYD - 6PGD_ECOLI -
5 PsiBlast_PDB 83.7055% -66 - C3 -2ZYD - 6PGD_ECOLI -
3 PsiBlast_PDB 82.9155% -68 - C3 -3FWN - 6PGD_ECOLI -
25 PsiBlast_CBE 82.7555% -62 - C3 -2ZYA 3.9 6PGD_ECOLI
23 PsiBlast_CBE 82.4255% -62 - C3 -3FWN 5.4 6PGD_ECOLI
4 PsiBlast_PDB 82.4055% -64 - C3 -2ZYA 3.9 6PGD_ECOLI
24 PsiBlast_CBE 82.0955% -62 - C3 -2ZYD 3.2 6PGD_ECOLI
6 PsiBlast_PDB 81.9254% -62 - C3 -2ZYG - ? -
79 HHSearch 78.5652% -43 * C3 *2IZ1 - 6PGD_LACLM -
10 PsiBlast_PDB 78.2952% -44 - C3 -2IZ1 - 6PGD_LACLM -
14 PsiBlast_PDB 78.2149% -26 - C3 -1PGP 3.2 6PGD_SHEEP
8 PsiBlast_PDB 77.9352% -44 - C3 -2IYO 3.9 6PGD_LACLM
26 PsiBlast_CBE 77.8752% -47 - C3 -2IYP - 6PGD_LACLM -
28 PsiBlast_CBE 77.7652% -43 - C3 -2IZ1 - 6PGD_LACLM -
9 PsiBlast_PDB 77.6852% -44 - C3 -2IZ0 - 6PGD_LACLM -
30 PsiBlast_CBE 77.6052% -45 - C3 -2IZ0 - 6PGD_LACLM -
12 PsiBlast_PDB 76.7649% -30 - C3 -1PGN 5.7 6PGD_SHEEP
13 PsiBlast_PDB 76.3049% -25 - C3 -1PGO 6.6 6PGD_SHEEP
17 PsiBlast_PDB 76.2549% -20 - C3 -4GWG 2.8 6PGD_HUMAN
18 PsiBlast_PDB 76.1849% -21 - C3 -4GWK 3.4 6PGD_HUMAN
11 PsiBlast_PDB 75.6147% -27 - C3 -2P4Q 3.5 6PGD1_YEAST
78 HHSearch 75.4948% -20 - C3 -4GWG 2.8 6PGD_HUMAN
76 HHSearch 75.4448% -29 - C3 -2P4Q 3.5 6PGD1_YEAST