@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu40420: (2016-08-07 )
MSSVVVVGTQWGDEGKGKITDFLSENAEVIARYQGGNNAGHTIKFDGITYKLHLIPSGIFYKDKTCVIGNGMVVDPKALVTELAYLHERNVSTDNLRISNRAHVILPYHLKLDEVEEERKGANKIGTTKKGIGPAYMDKAARIGIRIADLLDRDAFAEKLERNLEEKNRLLEKMYETEGFKLEDILDEYYEYGQQIKKYVCDTSVVLNDALDEGRRVLFEGAQGVMLDIDQGTYPFVTSSNPVAAVSQSVLVSARPKIKHVVGVSKAYTTRVGDGPFPTELKDEIGDQIREVGREYGTTTGRPPRVGWFDSVVVRHARRVSGITDLSLNSIDVLAGIETLKICVRYRYKGEIIEEFPASLKALAECEPVYEEMPGWTEDITGAKSLSELPENARHYLERVSQLTGIPLSIFSVGPDRSQTNVLRSVYRAN

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGS_A_5(1KSZ)
PURA_ECOLI
[Raw transfer]




PGS_A_5(1NHT)
PURA_ECOLI
[Raw transfer]




RPD_A_5(1QF4)
PURA_ECOLI
[Raw transfer]




2SA_A_5(1MEZ)
PURA1_MOUSE
[Raw transfer]




DOI_A_3(2GCQ)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




DOI_A_3(2DGN)
PURA1_MOUSE
[Raw transfer]




IMP_C_3(1KJX)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




AMP_A_3(4M9D)
PURA_BACAN
[Raw transfer]




AMP_A_3(4M9D)
PURA_BACAN
[Raw transfer]




IMP_A_8(1IWE)
PURA1_MOUSE
[Raw transfer]




IMP_A_5(1KKF)
PURA_ECOLI
[Raw transfer]




IMP_E_5(1KKB)
PURA_ECOLI
[Raw transfer]




AMP_E_5(1MF1)
PURA1_MOUSE
[Raw transfer]




AMP_C_3(1SON)
PURA_ECOLI
[Raw transfer]




H5P_A_6(1SOO)
PURA_ECOLI
[Raw transfer]




GCP_A_3(1HOP)
PURA_ECOLI
[Raw transfer]




GDP_D_4(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_A_4(2GCQ)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1GIN)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_C_3(1DJ3)
PURA_WHEAT
[Raw transfer]




GCP_B_4(1HOP)
PURA_ECOLI
[Raw transfer]




GDP_A_4(1CIB)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1GIM)
PURA_ECOLI
[Raw transfer]




GDP_A_4(1JUY)
PURA_ECOLI
[Raw transfer]




GPX_A_4(1CH8)
PURA_ECOLI
[Raw transfer]




GDP_A_4(1CG4)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_D_4(1DJ2)
PURA_ARATH
[Raw transfer]




DPO_A_3(1KKF)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG0)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG1)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1LON)
PURA1_MOUSE
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




GDP_A_6(1LNY)
PURA1_MOUSE
[Raw transfer]




GDP_A_5(1CG3)
PURA_ECOLI
[Raw transfer]




GTP_C_3(1LOO)
PURA1_MOUSE
[Raw transfer]




GDP_A_5(1MF0)
PURA1_MOUSE
[Raw transfer]




GDP_B_7(1LNY)
PURA1_MOUSE
[Raw transfer]




GDP_A_4(2DGN)
PURA1_MOUSE
[Raw transfer]




GNH_A_3(1HOO)
PURA_ECOLI
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




IMP_B_7(1IWE)
PURA1_MOUSE
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




GNH_A_3(1HON)
PURA_ECOLI
[Raw transfer]




HAD_C_3(1KKB)
PURA_ECOLI
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




CIT_A_2(3R7T)
PURA_CAMJE
[Raw transfer]




62 HHSearch 80.2479% -38 - C5 -4M9D 6.6 PURA_BACAN
2 PsiBlast_PDB 79.1777% -76 - C5 -4M9D 6.6 PURA_BACAN
1 PsiBlast_PDB 78.4677% -85 - C5 -4M0G - PURA_BACAN -
16 PsiBlast_PDB 66.8645% -10 - C5 -1SOO 5.2 PURA_ECOLI
15 PsiBlast_PDB 66.8045% -12 - C5 -1SON 5.4 PURA_ECOLI
6 PsiBlast_PDB 66.5145% -6 - C5 -1KKF 7.2 PURA_ECOLI
20 PsiBlast_PDB 66.3045% -12 - C5 -1GIM 7.5 PURA_ECOLI
10 PsiBlast_PDB 66.1145% -10 - C5 -1CH8 6.2 PURA_ECOLI
5 PsiBlast_PDB 66.0045% -10 - C5 -1KKB 6.6 PURA_ECOLI
30 PsiBlast_CBE 65.8345% -10 - C5 -1CG3 7.0 PURA_ECOLI
28 PsiBlast_CBE 65.7745% -8 - C5 -1CG1 6.5 PURA_ECOLI
26 PsiBlast_CBE 65.7145% -17 - C5 -1HOP 5.5 PURA_ECOLI
4 PsiBlast_PDB 65.6745% -9 - C5 -1KJX 5.5 PURA_ECOLI
12 PsiBlast_PDB 65.6545% -12 - C5 -1QF5 6.8 PURA_ECOLI
14 PsiBlast_PDB 65.5945% -8 - C5 -2GCQ 8.5 PURA_ECOLI
13 PsiBlast_PDB 65.5345% -8 - C5 -1CIB 6.4 PURA_ECOLI
9 PsiBlast_PDB 65.5045% -9 - C5 -1CG0 7.3 PURA_ECOLI
61 HHSearch 65.4741% -17 - C5 -2V40 5.6 PURA2_HUMAN
11 PsiBlast_PDB 65.4645% -10 - C5 -1QF4 7.2 PURA_ECOLI
7 PsiBlast_PDB 65.4345% -18 - C5 -1HON 6.1 PURA_ECOLI
25 PsiBlast_CBE 65.3645% -7 - C5 -1JUY 7.6 PURA_ECOLI
8 PsiBlast_PDB 65.3545% -22 - C5 -1HOP 5.6 PURA_ECOLI
27 PsiBlast_CBE 65.2645% -12 - C5 -1GIN 6.8 PURA_ECOLI
19 PsiBlast_PDB 65.2245% -16 - C5 -1HOO 6.7 PURA_ECOLI
29 PsiBlast_CBE 65.1745% -9 - C5 -1CG4 7.5 PURA_ECOLI
23 PsiBlast_CBE 65.1045% -9 - C5 -1NHT 6.8 PURA_ECOLI
52 Fugue 64.7945% 5 - C5 -1QF5 6.8 PURA_ECOLI
24 PsiBlast_CBE 64.5245% -7 - C5 -1KSZ 6.5 PURA_ECOLI
67 HHSearch 63.7540% -0 - C5 -1P9B 6.6 PURA_PLAFA
66 HHSearch 63.3145% -40 - C5 -3R7T 3.9 PURA_CAMJE
35 PsiBlast_CBE 62.3939% 14 - C5 -1P9B 6.1 PURA_PLAFA
45 PsiBlast_CBE 61.7142% -6 - C5 -1IWE 5.5 PURA1_MOUSE
36 PsiBlast_CBE 61.4840% -13 - C5 -2V40 5.2 PURA2_HUMAN
44 PsiBlast_CBE 61.3142% -6 - C5 -1LNY 5.8 PURA1_MOUSE
37 PsiBlast_CBE 61.1942% -3 - C5 -2DGN 6.7 PURA1_MOUSE
43 PsiBlast_CBE 61.1142% -4 - C5 -1LNY 5.9 PURA1_MOUSE
40 PsiBlast_CBE 60.9042% -2 - C5 -1MEZ 6.5 PURA1_MOUSE
41 PsiBlast_CBE 60.7442% -8 - C5 -1LOO 5.1 PURA1_MOUSE
39 PsiBlast_CBE 60.6742% -4 - C5 -1MF0 5.3 PURA1_MOUSE
46 PsiBlast_CBE 60.5842% -4 - C5 -1IWE 4.7 PURA1_MOUSE
65 HHSearch 60.4541% 3 * C5 *1DJ2 5.9 PURA_ARATH
42 PsiBlast_CBE 60.3742% -3 - C5 -1LON 7.2 PURA1_MOUSE
38 PsiBlast_CBE 59.7642% -4 - C5 -1MF1 4.7 PURA1_MOUSE
33 PsiBlast_CBE 58.2142% 10 - C5 -1DJ2 5.8 PURA_ARATH
34 PsiBlast_CBE 58.1942% 8 - C5 -1DJ2 6.2 PURA_ARATH
32 PsiBlast_CBE 58.0442% 4 - C5 -1DJ3 6.0 PURA_WHEAT
31 PsiBlast_CBE 57.7742% 4 - C5 -1DJ3 6.5 PURA_WHEAT