@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu40880: (2016-08-08 )
MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDLQPEDYHVYWNYAVKKGYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERIDYRMQWEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAFTRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASISADVMGSDHCPVELIINI

Atome Classification :

(63 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEG_A_10(3W2Y)
?
[Raw transfer]



UNL_A_16(3MPR)
?
[Raw transfer]



UNL_A_13(3MPR)
?
[Raw transfer]



BCN_A_3(2JC5)
?
[Raw transfer]



NACID_I_4(3G3C)
?
[Raw transfer]
-
NACID_Y_8(4B5G)
?
[Raw transfer]
-
EDO_A_7(5DFI)
APEX1_HUMAN
[Raw transfer]



EDO_A_11(5DG0)
APEX1_HUMAN
[Raw transfer]



FMT_A_13(3W2Y)
?
[Raw transfer]



NACID_I_3(3G2C)
?
[Raw transfer]
-
NACID_I_3(3G2C)
?
[Raw transfer]
-
NACID_G_3(3G0R)
?
[Raw transfer]
-
NACID_G_3(3G0R)
?
[Raw transfer]
-
NACID_H_5(3GA6)
?
[Raw transfer]
-
NACID_H_3(3G4T)
?
[Raw transfer]
-
NACID_I_3(3G3Y)
?
[Raw transfer]
-
GOL_A_15(3G2D)
?
[Raw transfer]



GOL_A_10(3G0R)
?
[Raw transfer]



FMT_A_11(3W2Y)
?
[Raw transfer]



NACID_H_3(3G00)
?
[Raw transfer]
-
NACID_H_3(3G4T)
?
[Raw transfer]
-
NACID_X_1(1DEW)
APEX1_HUMAN
[Raw transfer]
-
MPD_B_12(3G00)
?
[Raw transfer]



NACID_H_3(3G00)
?
[Raw transfer]
-
FMT_A_5(3W2Y)
?
[Raw transfer]



NACID_H_3(3G3C)
?
[Raw transfer]
-
BCN_A_3(2JC5)
?
[Raw transfer]



FMT_A_5(3W2X)
?
[Raw transfer]



NACID_U_3(1DEW)
APEX1_HUMAN
[Raw transfer]
-
NACID_F_3(3GA6)
?
[Raw transfer]
-
NACID_I_4(3G3C)
?
[Raw transfer]
-
NACID_V_4(5DFJ)
APEX1_HUMAN
[Raw transfer]
-
NACID_Z_9(4B5G)
?
[Raw transfer]
-
NACID_X_4(4B5I)
?
[Raw transfer]
-
MPD_A_9(3G00)
?
[Raw transfer]



NACID_V_4(5DFH)
APEX1_HUMAN
[Raw transfer]
-
NACID_V_4(1DE8)
APEX1_HUMAN
[Raw transfer]
-
NACID_G_2(3G38)
?
[Raw transfer]
-
NACID_V_8(4B5M)
?
[Raw transfer]
-
NACID_Y_2(1DE8)
APEX1_HUMAN
[Raw transfer]
-
NACID_V_5(5DFF)
APEX1_HUMAN
[Raw transfer]
-
NACID_Z_3(1DE9)
APEX1_HUMAN
[Raw transfer]
-
NACID_U_2(4B5H)
?
[Raw transfer]
-
NACID_V_3(4B5F)
?
[Raw transfer]
-
NACID_V_4(5DG0)
APEX1_HUMAN
[Raw transfer]
-
NACID_W_6(1DE9)
APEX1_HUMAN
[Raw transfer]
-
NACID_U_2(4B5J)
?
[Raw transfer]
-
NACID_Z_12(4B5M)
?
[Raw transfer]
-
NACID_X_10(4B5M)
?
[Raw transfer]
-
NACID_V_4(5DFI)
APEX1_HUMAN
[Raw transfer]
-
NACID_M_12(4IEM)
APEX1_HUMAN
[Raw transfer]
-
NACID_P_16(4IEM)
APEX1_HUMAN
[Raw transfer]
-
NACID_J_8(4IEM)
APEX1_HUMAN
[Raw transfer]
-
NACID_K_4(3G2D)
?
[Raw transfer]
-
NACID_Z_9(4B5G)
?
[Raw transfer]
-
NACID_I_6(3G2D)
?
[Raw transfer]
-
19 PsiBlast_PDB 91.1849% 0 - C- -4IEM - APEX1_HUMAN -
9 PsiBlast_PDB 87.7249% -80 - C1 -1HD7 - APEX1_HUMAN -
1 PsiBlast_PDB 83.6954% 0 - C1 -2O3C - APEX1_DANRE -
22 PsiBlast_CBE 83.3254% 3 - C1 -2O3C - APEX1_DANRE -
35 PsiBlast_CBE 82.8450% -10 - C1 -5DFI - APEX1_HUMAN -
34 PsiBlast_CBE 82.8250% -14 - C1 -5DG0 - APEX1_HUMAN -
4 PsiBlast_PDB 82.4750% 6 - C1 -4QHE - APEX1_HUMAN -
36 PsiBlast_CBE 82.2350% -11 - C1 -5DFF - APEX1_HUMAN -
5 PsiBlast_PDB 82.0750% 2 - C1 -2O3H - APEX1_HUMAN -
11 PsiBlast_PDB 81.8850% 4 - C1 -1BIX - APEX1_HUMAN -
15 PsiBlast_PDB 81.4450% 7 - C1 -5DFH 5.7 APEX1_HUMAN
3 PsiBlast_PDB 81.3050% 8 - C1 -4QHD - APEX1_HUMAN -
96 HHSearch 81.1549% 3 - C1 -4QHE - APEX1_HUMAN -
37 PsiBlast_CBE 80.9549% 3 - C1 -4IEM 5.6 APEX1_HUMAN
21 PsiBlast_CBE 80.8154% -0 - C1 -2O3C - APEX1_DANRE -
42 PsiBlast_CBE 80.6949% -9 - C1 -5DFJ - APEX1_HUMAN -
97 HHSearch 80.6349% -44 - C1 -1HD7 - APEX1_HUMAN -
2 PsiBlast_PDB 80.4850% 11 - C1 -4QH9 - APEX1_HUMAN -
31 PsiBlast_CBE 80.2350% 9 - C1 -4LND - APEX1_HUMAN -
13 PsiBlast_PDB 80.2150% 8 - C1 -4LND - APEX1_HUMAN -
17 PsiBlast_PDB 80.0550% 8 - C1 -5DG0 5.5 APEX1_HUMAN
16 PsiBlast_PDB 80.0050% 8 - C1 -5DFI 5.5 APEX1_HUMAN
20 PsiBlast_PDB 79.9649% 4 - C1 -5DFJ 3.3 APEX1_HUMAN
38 PsiBlast_CBE 79.9349% 6 - C1 -4IEM 4.7 APEX1_HUMAN
43 PsiBlast_CBE 79.7445% -6 - C1 -3W2X 2.8 ?
33 PsiBlast_CBE 79.2649% 6 - C1 -1DEW 8.0 APEX1_HUMAN
7 PsiBlast_PDB 79.1550% 8 - C1 -1DE9 6.8 APEX1_HUMAN
67 PsiBlast_CBE 79.0044% 1 - C1 -3W2Y 2.8 ?
39 PsiBlast_CBE 78.9049% 1 - C1 -4IEM 6.4 APEX1_HUMAN
24 PsiBlast_CBE 78.8150% 8 - C1 -1DE8 4.9 APEX1_HUMAN
23 PsiBlast_CBE 78.8050% 3 - C1 -1DE9 6.4 APEX1_HUMAN
14 PsiBlast_PDB 78.6150% 6 - C1 -5DFF 7.1 APEX1_HUMAN
68 PsiBlast_CBE 78.0344% -1 - C1 -3W2Y 3.6 ?
12 PsiBlast_PDB 78.0049% 8 - C1 -1DEW 5.1 APEX1_HUMAN
63 PsiBlast_CBE 76.7445% 4 - C1 -3G0R 2.9 ?
6 PsiBlast_PDB 76.6050% 7 - C1 -1DE8 4.7 APEX1_HUMAN
62 PsiBlast_CBE 75.7445% 1 - C1 -3G0R 7.5 ?
49 PsiBlast_CBE 75.7345% 7 - C1 -3G3C Error ?
46 PsiBlast_CBE 75.3845% 7 - C1 -3G3Y 7.2 ?
45 PsiBlast_CBE 75.0145% 5 - C1 -3G4T 0.4 ?
65 PsiBlast_CBE 74.9245% 7 - C1 -3G00 5.4 ?
64 PsiBlast_CBE 74.8045% 6 - C1 -3G00 2.7 ?
60 PsiBlast_CBE 74.7145% 6 - C1 -3G2D 5.6 ?
51 PsiBlast_CBE 74.5445% 8 - C1 -3G2C 3.0 ?
44 PsiBlast_CBE 74.5045% 9 - C1 -3G4T 6.2 ?
56 PsiBlast_CBE 74.4045% 8 - C1 -3GA6 4.7 ?
59 PsiBlast_CBE 74.3345% 2 - C1 -3G38 1.1 ?
61 PsiBlast_CBE 74.1445% 8 - C1 -3G2D 4.8 ?
50 PsiBlast_CBE 74.1445% 12 - C1 -3G2C 7.6 ?
48 PsiBlast_CBE 74.0745% 8 - C1 -3G3C 4.9 ?
57 PsiBlast_CBE 72.7745% 12 - C1 -3GA6 2.1 ?
73 PsiBlast_CBE 72.3038% -3 - C1 -4B5I 1.1 ?
75 PsiBlast_CBE 71.7438% 1 - C1 -4B5G Error ?
95 HHSearch 70.9538% -4 - C1 -2JC5 Error ?
77 PsiBlast_CBE 70.9038% 4 - C1 -4B5F 4.8 ?
74 PsiBlast_CBE 70.8238% 2 - C1 -4B5G 5.5 ?
76 PsiBlast_CBE 70.6438% 2 - C1 -4B5G 3.3 ?
72 PsiBlast_CBE 69.7838% 2 - C1 -4B5J 2.5 ?
78 PsiBlast_CBE 69.2838% 1 - C1 -2JC5 Error ?
71 PsiBlast_CBE 68.4338% 4 - C1 -4B5M 3.2 ?
79 PsiBlast_CBE 67.7937% 0 - C1 -4B5H Error ?
69 PsiBlast_CBE 67.4338% 3 - C1 -4B5M 2.7 ?
70 PsiBlast_CBE 67.3138% 3 - C1 -4B5M 2.8 ?