@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu41000: (2016-08-08 )
MNIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPIEG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAM_B_5(3G8B)
RSMG_THET8
[Raw transfer]
37 HHSearch 96.40100%-116 - C1 -1XDZ - RSMG_BACSU -
1 PsiBlast_PDB 96.40100%-116 - C1 -1XDZ - RSMG_BACSU -
5 PsiBlast_PDB 75.2839%-123 - C1 -3G8B - RSMG_THET8 -
20 PsiBlast_CBE 74.5239%-117 - C1 -3G8B 7.4 RSMG_THET8
28 Fugue 69.2934%-137 - C1 -1JSX - RSMG_ECOLI -
6 PsiBlast_PDB 67.3833%-142 - C1 -1JSX - RSMG_ECOLI -
39 HHSearch 65.4034%-128 - C1 -1JSX - RSMG_ECOLI -
49 HHSearch 41.8220% -74 * C1 *1XXL - YCGJ_BACSU -
40 HHSearch 40.0815% -91 - C1 -2B3T - PRMC_ECOLI -
24 PsiBlast_CBE 39.6039% -7 - C1 -3G8A - RSMG_THET8 -
56 HHSearch 39.5915% -81 - C1 -4X1O - ? -
25 PsiBlast_CBE 39.3739% -9 - C1 -3G8A - RSMG_THET8 -
23 PsiBlast_CBE 39.2839% -10 - C1 -3G8A - RSMG_THET8 -
21 PsiBlast_CBE 39.2639% -9 - C1 -3G8A - RSMG_THET8 -
22 PsiBlast_CBE 39.1639% -11 - C1 -3G8A - RSMG_THET8 -
26 PsiBlast_CBE 39.0339% -10 - C1 -3G89 - RSMG_THET8 -
3 PsiBlast_PDB 38.9539% -10 - C1 -3G89 - RSMG_THET8 -
27 PsiBlast_CBE 38.8939% -11 - C1 -3G88 - RSMG_THET8 -
38 HHSearch 38.8538% -2 - C1 -3G89 - RSMG_THET8 -
2 PsiBlast_PDB 38.8439% -14 - C1 -3G88 - RSMG_THET8 -