@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0020c: (2016-04-18 )
MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPDQGGYPEQRGYPEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGYGPSPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPRVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_B_2(3POA)

[Raw transfer]
-
4 PsiBlast_PDB 85.69100%-126 - C1 -3PO8 - -
5 PsiBlast_PDB 84.37100%-122 - C1 -3POA 6.8
38 HHSearch 84.33100%-126 - C1 -3PO8 - -
34 HHSearch 81.13100%-115 - C1 -3OUN - -
2 PsiBlast_PDB 80.8298%-115 - C1 -3OUN - -
53 Fugue 79.00100% -85 * C2 *2LC0 - FHAA_MYCTU -
1 PsiBlast_PDB 78.95100% -85 - C2 -2LC0 - FHAA_MYCTU -
33 HHSearch 78.61100% -86 - C2 -2LC0 - FHAA_MYCTU -
3 PsiBlast_PDB 77.2999% -96 - C1 -2LC1 - -
39 HHSearch 59.6831% -76 * C1 *2XT9 - ? -
9 PsiBlast_PDB 59.0331% -71 - C1 -2FEZ - EMBR_MYCTU -
10 PsiBlast_PDB 58.8031% -74 - C1 -2FF4 - EMBR_MYCTU -
62 Fugue 58.4227% -88 - C1 -1MZK - P2C70_ARATH -
21 PsiBlast_CBE 57.5531% -76 - C1 -2FF4 - EMBR_MYCTU -
54 Fugue 56.9027% -95 - C1 -1R21 - KI67_HUMAN -
55 Fugue 55.6717% -93 - C1 -1WLN - -
40 HHSearch 55.1430%-109 - C1 -1R21 - KI67_HUMAN -
13 PsiBlast_PDB 54.6430% -77 - C1 -4QCJ - ODHI_CORGL -
57 Fugue 54.1419% -89 - C1 -4A0E - ? -
46 HHSearch 53.3525% -91 - C1 -3VA4 - MDC1_MOUSE -