@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0024: (2016-04-18 )
MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVLTARRRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGRAGIAVHAALSRLGRPYVWGATGPNQFDCSGLVQWAYAQAGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPHPGHVQLAIGNNLVVEAPHAGASVRVSSLGNNVQIRRPLSGR

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_A_4(2HBW)
?
[Raw transfer]




FMT_A_3(4Q4T)
RIPA_MYCTU
[Raw transfer]




GOL_A_4(4Q4T)
RIPA_MYCTU
[Raw transfer]




GOL_A_3(3M1U)
?
[Raw transfer]




MES_A_9(3M1U)
?
[Raw transfer]




1 PsiBlast_PDB 94.1031% -78 - C1 -3PBC - RIPA_MYCTU -
6 PsiBlast_PDB 93.9131% -77 - C1 -4Q4G - -
38 HHSearch 93.8235% -84 - C1 -3PBI - RIPB_MYCTU -
3 PsiBlast_PDB 93.7931% -84 - C1 -4Q4T 3.7 RIPA_MYCTU
7 PsiBlast_PDB 93.2031% -78 - C1 -3S0Q - RIPA_MYCTU -
2 PsiBlast_PDB 93.1431% -77 - C1 -3NE0 - -
4 PsiBlast_PDB 92.4931% -73 - C1 -4Q4N - -
39 HHSearch 91.8936% -88 - C1 -4Q4G - -
8 PsiBlast_PDB 87.3638% -89 - C1 -3PBI - RIPB_MYCTU -
46 HHSearch 85.0437% -79 * C1 *4XCM - ? -
21 PsiBlast_CBE 84.2537% -67 - C1 -3I86 - ? -
9 PsiBlast_PDB 83.6837% -77 - C1 -3I86 - ? -
41 HHSearch 82.6937% -95 - C1 -4LJ1 - ? -
10 PsiBlast_PDB 82.2840% -90 - C1 -4XCM - ? -
14 PsiBlast_PDB 80.8734% -98 - C1 -4LJ1 - ? -
13 PsiBlast_PDB 80.7434% -87 - C1 -4JXB - ? -
18 PsiBlast_PDB 80.7033% -88 - C1 -3GT2 - ? -
5 PsiBlast_PDB 80.6331% -53 - C- -2XIV - -
22 PsiBlast_CBE 80.3434% -94 - C1 -4JXB - ? -
40 HHSearch 80.1434% -76 - C1 -2K1G - MEPS_ECOLI -
47 HHSearch 78.7930% -85 - C1 -2HBW 4.4 ?