@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0032: (2016-04-18 )
MPTGLGYDFLRPVEDSGINDLKHYYFMADLADGQPLGRANLYSVCFDLATTDRKLTPAWRTTIKRWFPGFMTFRFLECGLLTMVSNPLALRSDTDLERVLPVLAGQMDQLAHDDGSDFLMIRDVDPEHYQRYLDILRPLGFRPALGFSRVDTTISWSSVEEALGCLSHKRRLPLKTSLEFRERFGIEVEELDEYAEHAPVLARLWRNVKTEAKDYQREDLNPEFFAACSRHLHGRSRLWLFRYQGTPIAFFLNVWGADENYILLEWGIDRDFEHYRKANLYRAALMLSLKDAISRDKRRMEMGITNYFTKLRIPGARVIPTIYFLRHSTDPVHTATLARMMMHNIQRPTLPDDMSEEFCRWEERIRLDQDGLPEHDIFRKIDRQHKYTGLKLGGVYGFYPRFTGPQRSTVKAAELGEIVLLGTNSYLGLATHPEVVEASAEATRRYGTGCSGSPLLNGTLDLHVSLEQELACFLGKPAAVLCSTGYQSNLAAISALCESGDMIIQDALNHRSLFDAARLSGADFTLYRHNDMDHLARVLRRTEGRRRIIVVDAVFSMEGTVADLATIAELADRHGCRVYVDESHALGVLGPDGRGASAALGVLARMDVVMGTFSKSFASVGGFIAGDRPVVDYIRHNGSGHVFSASLPPAAAAATHAALRVSRREPDRRARVLAAAEYMATGLARQGYQAEYHGTAIVPVILGNPTVAHAGYLRLMRSGVYVNPVAPPAVPEERSGFRTSYLADHRQSDLDRALHVFAGLAEDLTPQGAAL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLS_A_2(2W8J)
?
[Raw transfer]




PLS_A_2(2W8W)
?
[Raw transfer]




PMP_A_2(2XBN)
?
[Raw transfer]




PLP_A_3(3TQX)
?
[Raw transfer]




PLP_A_3(3TQX)
?
[Raw transfer]




PLP_A_3(3A2B)
?
[Raw transfer]




PLP_A_5(1DJE)
BIOF_ECOLI
[Raw transfer]




PLP_A_3(3A2B)
?
[Raw transfer]




LLF_A_3(2G6W)
BIOF_ECOLI
[Raw transfer]




MYB_A_4(4BMK)
?
[Raw transfer]




MYB_B_8(4BMK)
?
[Raw transfer]




AKB_A_3(1FC4)
KBL_ECOLI
[Raw transfer]




AKB_A_3(1FC4)
KBL_ECOLI
[Raw transfer]




50 HHSearch 97.7737% -97 * C1 *3A2B 2.9 ?
1 PsiBlast_PDB 96.5938% -90 - C1 -3A2B 2.9 ?
12 PsiBlast_PDB 92.9530% -92 - C1 -3TQX 3.8 ?
52 HHSearch 92.3333% -94 - C1 -1FC4 4.6 KBL_ECOLI
10 PsiBlast_PDB 91.9936% -96 - C1 -2X8U - ? -
49 HHSearch 91.8032% -94 - C1 -3TQX 3.8 ?
13 PsiBlast_PDB 91.6433% -95 - C1 -1FC4 4.6 KBL_ECOLI
8 PsiBlast_PDB 90.0134% -94 - C1 -2W8W 3.9 ?
5 PsiBlast_PDB 89.8034% -93 - C1 -2XBN 4.1 ?
6 PsiBlast_PDB 89.4034% -93 - C1 -2W8T - ? -
11 PsiBlast_PDB 89.3934% -91 - C1 -4BMK 3.0 ?
4 PsiBlast_PDB 89.3034% -93 - C1 -2W8J 4.5 ?
9 PsiBlast_PDB 89.1634% -96 - C1 -2W8U - ? -
7 PsiBlast_PDB 89.1134% -96 - C1 -2W8V - ? -
2 PsiBlast_PDB 89.0434% -94 - C1 -2JG2 - ? -
31 PsiBlast_CBE 88.9131% -86 - C1 -1DJE 5.0 BIOF_ECOLI
20 PsiBlast_PDB 88.7631% -81 - C1 -1DJ9 - BIOF_ECOLI -
21 PsiBlast_CBE 88.6234% -95 - C1 -4BMK 2.6 ?
46 HHSearch 88.3330% -92 - C1 -2BWN - HEM1_RHOCB -
66 Fugue 88.3230% -90 - C1 -2BWN - HEM1_RHOCB -
18 PsiBlast_PDB 87.6733% -85 - C1 -2G6W 3.3 BIOF_ECOLI