@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0050: (2016-04-19 )
MVILLPMVTFTMAYLIVDVPKPGDIRTNQVSTILASDGSEIAKIVPPEGNRVDVNLSQVPMHVRQAVIAAEDRNFYSNPGFSFTGFARAVKNNLFGGDLQGGSTITQQYVKNALVGSAQHGWSGLMRKAKELVIATKMSGEWSKDDVLQAYLNIIYFGRGAYGISAASKAYFDKPVEQLTVAEGALLAALIRRPSTLDPAVDPEGAHARWNWVLDGMVETKALSPNDRAAQVFPETVPPDLARAENQTKGPNGLIERQVTRELLELFNIDEQTLNTQGLVVTTTIDPQAQRAAEKAVAKYLDGQDPDMRAAVVSIDPHNGAVRAYYGGDNANGFDFAQAGLQTGSSFKVFALVAALEQGIGLGYQVDSSPLTVDGIKITNVEGEGCGTCNIAEALKMSLNTSYYRLMLKLNGGPQAVADAAHQAGIASSFPGVAHTLSEDGKGGPPNNGIVLGQYQTRVIDMASAYATLAASGIYHPPHFVQKVVSANGQVLFDASTADNTGDQRIPKAVADNVTAAMEPIAGYSRGHNLAGGRDSAAKTGTTQFGDTTANKDAWMVGYTPSLSTAVWVGTVKGDEPLVTASGAAIYGSGLPSDIWKATMDGALKGTSNETFPKPTEVGGYAGVPPPPPPPEVPPSETVIQPTVEIAPGITIPIGPPTTITLAPPPPAPPAATPTPPP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DXF_A_3(3ZG9)
?
[Raw transfer]




PNM_A_3(3UDI)
?
[Raw transfer]




GOL_B_4(3ZG8)
?
[Raw transfer]




TLA_B_3(3ZG7)
?
[Raw transfer]




GOL_B_6(3ZGA)
?
[Raw transfer]




51 Fugue 95.3632% -70 - C1 -3UDI 3.8 ?
27 HHSearch 87.3626% -65 - C1 -2OLV - ? -
2 PsiBlast_PDB 87.3628% -51 - C1 -2OLV - ? -
1 PsiBlast_PDB 86.7328% -54 - C1 -2OLU - ? -
3 PsiBlast_PDB 81.3127% -76 - C1 -5FGZ - PBPB_ECOLI -
24 HHSearch 80.6729% -65 - C1 -4OON - PBPA_PSEAE -
8 PsiBlast_PDB 79.0927% -74 - C1 -3FWL - PBPB_ECOLI -
6 PsiBlast_PDB 78.6029% -83 - C1 -3ZG9 3.8 ?
7 PsiBlast_PDB 77.9829% -80 - C1 -3ZG7 3.9 ?
4 PsiBlast_PDB 77.7629% -83 - C1 -3ZG8 2.3 ?
28 HHSearch 77.7127% -70 - C1 -3ZG9 - ? -
5 PsiBlast_PDB 77.6929% -80 - C1 -3ZGA 3.1 ?
31 HHSearch 63.7524% -51 - C1 -2V2F - ? -
39 HHSearch 63.7326% -61 - C1 -4MNR - ? -
59 Fugue 62.9718% -41 - C1 -1QME - PBPX_STRPN -
56 Fugue 62.9020% -49 - C1 -3OC2 - ? -
36 HHSearch 62.5923% -55 - C1 -3UN7 - PBPA_MYCTU -
58 Fugue 62.2917% -42 - C1 -1QME - PBPX_STRPN -
38 HHSearch 62.1719% -49 * C1 *3EQU - PBP2_NEIGO -
32 HHSearch 61.4523% -55 - C1 -2Y2M - ? -