@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0062: (2016-04-19 )
MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAARNANPPNAELTSVANTPQSYWLDQAFPPATVGGTVARYTGAAQAAGAMPVLTLYGIPHRDCGSYASGGFATGTDYRGWIDAVASGLGSSPATIIVEPDALAMADCLSPDQRQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWLSAEAMAARLNDVGVGRARGFSLNVSNFYTTDEEIGYGEAISGLTNGSHYVIDTSRNGAGPAPDAPLNWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTCGRGEPQAGRFVSQYAIDLAHNAGQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GTM_A_7(1OCB)
GUX6_HUMIN
[Raw transfer]



SUGAR_X_2(2BOF)
GUN2_THEFU
[Raw transfer]
-
GDA_A_6(1OCB)
GUX6_HUMIN
[Raw transfer]



EPE_A_2(3VOG)
?
[Raw transfer]



EPE_A_2(3VOG)
?
[Raw transfer]



GOL_A_6(1BVW)
GUX6_HUMIN
[Raw transfer]



SUGAR_X_2(2BOG)
GUN2_THEFU
[Raw transfer]
-
GOL_A_5(1OC5)
GUX6_HUMIN
[Raw transfer]



SUGAR_X_2(2BOG)
GUN2_THEFU
[Raw transfer]
-
SUGAR_X_2(2BOD)
GUN2_THEFU
[Raw transfer]
-
SSG_A_5(1OCJ)
GUX6_HUMIN
[Raw transfer]



CBI_A_3(4A05)
?
[Raw transfer]



SGC_A_10(1OC7)
GUX6_HUMIN
[Raw transfer]



BGC_A_9(1OC7)
GUX6_HUMIN
[Raw transfer]



BGC_A_4(3A9B)
?
[Raw transfer]



SSG_A_4(1UOZ)
?
[Raw transfer]



SSG_A_4(1UOZ)
?
[Raw transfer]



SUGAR_A_2(1UP3)
?
[Raw transfer]
-
1 PsiBlast_PDB 98.62100% -82 - C4 -1UOZ 2.7 ?
2 PsiBlast_PDB 98.16100% -82 - C4 -1UP3 2.4 ?
22 HHSearch 97.4497% -80 - C4 -1UOZ 2.7 ?
29 HHSearch 82.4031% -55 - C4 -4B4H - ? -
4 PsiBlast_PDB 78.6042% -77 - C4 -1TML - GUN2_THEFU -
7 PsiBlast_PDB 77.9841% -82 - C4 -2BOG 4.8 GUN2_THEFU
5 PsiBlast_PDB 77.9241% -77 - C4 -2BOE - GUN2_THEFU -
3 PsiBlast_PDB 77.6942% -84 - C4 -2BOD 4.2 GUN2_THEFU
25 HHSearch 77.1926% -58 - C4 -3A9B 2.4 ?
6 PsiBlast_PDB 77.1641% -82 - C4 -2BOF 8.0 GUN2_THEFU
24 HHSearch 76.5830% -58 - C4 -3VOG 3.4 ?
20 PsiBlast_PDB 75.3428% -60 - C4 -3VOG 3.4 ?
23 HHSearch 75.1741% -77 - C4 -2BOG 4.9 GUN2_THEFU
26 HHSearch 75.0829% -60 - C4 -1DYS - GUN6_HUMIN -
21 PsiBlast_CBE 72.3139% -82 - C4 -3RPT - GUN2_THEFU -
28 HHSearch 72.2227% -49 - C4 -4AU0 - GUX2_HYPJE -
27 HHSearch 72.2029% -47 - C4 -1OC7 - GUX6_HUMIN -
17 PsiBlast_PDB 71.7028% -65 - C4 -1OC5 3.2 GUX6_HUMIN
12 PsiBlast_PDB 71.4729% -57 - C4 -1OCB 3.8 GUX6_HUMIN
15 PsiBlast_PDB 71.3929% -58 - C4 -1GZ1 - GUX6_HUMIN -