@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0082: (2016-04-19 )
MGWVAKIFRVGRVVEPAAPLPAAIAEPPAGVRGSLQIRHVDAGSCNGCEVEISGAFGPVYDAERFGARLVASPQHADALLVTGVVTHNMAGPLRKTLEATPRPRVVIACGDCALNRGVFADAYGVVGAVGEVVPVDVEIAGCPPTPAAIMAALRSVTGK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SF4_S_4(1H2A)
PHNS_DESVM
[Raw transfer]




33 HHSearch 91.7221% -98 - C4 -4KN9 - PHSS_DESBA -
34 HHSearch 88.3723%-120 - C4 -4U9H - PHNS_DESVM -
35 HHSearch 87.6820%-105 - C4 -1YQ9 - PHNS_DESGI -
38 HHSearch 85.1723%-109 - C4 -1H2A 3.8 PHNS_DESVM
42 HHSearch 84.3020%-104 - C4 -4OMF - ? -
32 HHSearch 83.9023%-109 * C4 *4UQL - PHNS_DESFR -
36 HHSearch 83.0623%-100 - C4 -2WPN - ? -
31 HHSearch 80.5620% -97 - C4 -3MYR - ? -
41 HHSearch 80.1618%-105 - C4 -5AA5 - ? -
40 HHSearch 74.8519%-103 - C4 -5ADU - MBHS_ECOLI -
58 Fugue 72.0223% -65 - C4 -4ZM6 - ? -
39 HHSearch 71.9016%-105 - C4 -4IUC - MBHS_CUPNH -
27 PsiBlast_CBE 60.2635%-109 - C4 -1YQ9 - PHNS_DESGI -
15 PsiBlast_PDB 60.2532%-116 - C4 -1WUH - PHNS_DESVM -
2 PsiBlast_PDB 59.9035%-113 - C4 -1YQ9 - PHNS_DESGI -
20 PsiBlast_PDB 59.7432%-114 - C4 -4U9H - PHNS_DESVM -
14 PsiBlast_PDB 59.7432%-112 - C4 -1UBU - PHNS_DESVM -
17 PsiBlast_PDB 59.7132%-113 - C4 -1WUJ - PHNS_DESVM -
7 PsiBlast_PDB 59.6732%-116 - C4 -1UBJ - PHNS_DESVM -
8 PsiBlast_PDB 59.5732%-116 - C4 -1UBK - PHNS_DESVM -