@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0092: (2016-04-19 )
MTTAVTGEHHASVQRIQLRISGMSCSACAHRVESTLNKLPGVRAAVNFGTRVATIDTSEAVDAAALCQAVRRAGYQADLCTDDGRSASDPDADHARQLLIRLAIAAVLFVPVADLSVMFGVVPATRFTGWQWVLSALALPVVTWAAWPFHRVAMRNARHHAASMETLISVGITAATIWSLYTVFGNHSPIERSGIWQALLGSDAIYFEVAAGVTVFVLVGRYFEARAKSQAGSALRALAALSAKEVAVLLPDGSEMVIPADELKEQQRFVVRPGQIVAADGLAVDGSAAVDMSAMTGEAKPTRVRPGGQVIGGTTVLDGRLIVEAAAVGADTQFAGMVRLVEQAQAQKADAQRLADRISSVFVPAVLVIAALTAAGWLIAGGQPDRAVSAALAVLVIACPCALGLATPTAMMVASGRGAQLGIFLKGYKSLEATRAVDTVVFDKTGTLTTGRLQVSAVTAAPGWEADQVLALAATVEAASEHSVALAIAAATTRRDAVTDFRAIPGRGVSGTVSGRAVRVGKPSWIGSSSCHPNMRAARRHAESLGETAVFVEVDGEPCGVIAVADAVKDSARDAVAALADRGLRTMLLTGDNPESAAAVATRVGIDEVIADILPEGKVDVIEQLRDRGHVVAMVGDGINDGPALARADLGMAIGRGTDVAIGAADIILVRDHLDVVPLALDLARATMRTVKLNMVWAFGYNIAAIPVAAAGLLNPLVAGAAMAFSSFFVVSNSLRLRKFGRYPLGCGTVGGPQMTAPSSA

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_B_5(3A1C)
?
[Raw transfer]



ACP_B_5(3A1E)

[Raw transfer]



ATP_B_4(2YJ5)
?
[Raw transfer]



ADP_B_5(3A1D)
?
[Raw transfer]



ACP_A_3(3A1E)
COPA_ARCFU
[Raw transfer]



ATP_B_5(2YJ4)
?
[Raw transfer]



ADP_A_3(3A1D)
?
[Raw transfer]



ACP_A_3(3A1C)
?
[Raw transfer]



ACP_A_3(3A1C)
?
[Raw transfer]



GOL_A_5(2YJ3)
?
[Raw transfer]



A99_A_3(2YJ5)
?
[Raw transfer]



AMP_A_3(2YJ4)
?
[Raw transfer]



A99_A_3(2YJ6)
?
[Raw transfer]



A99_B_4(2YJ6)
?
[Raw transfer]



MGF_A_3(4BEV)
?
[Raw transfer]
4 PsiBlast_PDB 86.7936% -99 - C2 -3J09 - COPA_ARCFU -
44 HHSearch 86.4336% -98 - C2 -3J09 - COPA_ARCFU -
65 Fugue 86.3038%-109 - C2 -3RFU - ? -
3 PsiBlast_PDB 85.2038%-112 - C2 -4BYG - ? -
1 PsiBlast_PDB 84.9538%-111 - C2 -3RFU - ? -
2 PsiBlast_PDB 84.7438%-111 - C2 -4BEV 2.4 ?
22 PsiBlast_CBE 84.4038%-111 - C2 -3RFU - ? -
21 PsiBlast_CBE 84.2138%-111 - C2 -3RFU - ? -
23 PsiBlast_CBE 84.0838%-111 - C2 -3RFU - ? -
67 Fugue 77.1932%-102 - C2 -4UMW - ? -
5 PsiBlast_PDB 76.6238% -96 - C2 -3J08 - COPA_ARCFU -
47 HHSearch 76.0638% -96 - C2 -3J08 - COPA_ARCFU -
7 PsiBlast_PDB 75.1830%-104 - C2 -4UMW - ? -
46 HHSearch 74.4330%-103 - C2 -4UMW - ? -
6 PsiBlast_PDB 71.0030% -97 - C2 -4UMV - ? -
68 Fugue 63.4319% -80 - C2 -3B8E - AT1A1_PIG -
48 HHSearch 61.6123% -84 - C2 -2ZXE - ? -
51 HHSearch 57.5426% -75 - C2 -3B8C - PMA2_ARATH -
53 HHSearch 55.1040% -83 - C2 -3A1C 5.8 ?
24 PsiBlast_CBE 54.9139% -83 - C2 -3A1D 5.2 ?
12 PsiBlast_PDB 54.7639% -81 - C2 -3A1E 5.6 COPA_ARCFU
25 PsiBlast_CBE 54.6939% -85 - C2 -3A1C 6.6 ?
10 PsiBlast_PDB 54.5639% -81 - C2 -3A1C 6.4 ?
11 PsiBlast_PDB 54.3839% -80 - C2 -3A1D 5.5 ?
26 PsiBlast_CBE 54.3039% -82 - C2 -3A1E 5.6
16 PsiBlast_PDB 48.4633% -67 - C2 -2YJ4 2.3 ?
28 PsiBlast_CBE 48.2633% -72 - C2 -2YJ6 4.4 ?
18 PsiBlast_PDB 47.9933% -73 - C2 -2YJ6 5.1 ?
17 PsiBlast_PDB 47.6133% -67 - C2 -2YJ5 5.0 ?
15 PsiBlast_PDB 46.9933% -69 - C2 -2YJ3 2.5 ?
30 PsiBlast_CBE 46.7133% -64 - C2 -2YJ4 6.7 ?
29 PsiBlast_CBE 45.8333% -68 - C2 -2YJ5 5.6 ?