@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0116c: (2016-04-19 )
MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTFTTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEVVG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DWZ_B_4(4GSU)
LDT2_MYCTU
[Raw transfer]




MXR_B_6(3VYP)
LDT2_MYCTU
[Raw transfer]




BME_B_8(3U1Q)
LDT2_MYCTO
[Raw transfer]




MXR_A_4(3VYP)
LDT2_MYCTU
[Raw transfer]




6CL_A_8(3TUR)
LDT2_MYCTO
[Raw transfer]




BME_B_7(3U1Q)
LDT2_MYCTO
[Raw transfer]




PEG_B_9(3U1Q)
LDT2_MYCTO
[Raw transfer]




2 PsiBlast_PDB 99.71100%-121 - C5 -4JMX - LDT1_MYCTU -
1 PsiBlast_PDB 99.47100%-119 - C5 -4JMN - LDT1_MYCTU -
39 HHSearch 99.22100%-119 - C5 -4JMN - LDT1_MYCTU -
56 Fugue 85.1143%-107 - C5 -3TUR 2.3 LDT2_MYCTO
23 PsiBlast_CBE 84.2740%-109 - C5 -4GSU 3.5 LDT2_MYCTU
38 HHSearch 83.8551%-111 - C5 -4K73 - LDT3_MYCTU -
10 PsiBlast_PDB 83.3040%-108 - C5 -4QTF - LDT2_MYCTU -
13 PsiBlast_PDB 82.5540%-106 - C5 -4GSU - LDT2_MYCTU -
15 PsiBlast_PDB 82.5143%-112 - C5 -4HUC - LDT2_MYCTU -
9 PsiBlast_PDB 82.3940%-108 - C5 -3TUR - LDT2_MYCTO -
22 PsiBlast_CBE 82.3140%-108 - C5 -3U1Q 2.7 LDT2_MYCTO
27 PsiBlast_CBE 82.0740%-107 - C5 -3U1P - LDT2_MYCTO -
26 PsiBlast_CBE 82.0740%-107 - C5 -3VAE - LDT2_MYCTO -
24 PsiBlast_CBE 81.9843%-113 - C5 -3VYP 3.1 LDT2_MYCTU
12 PsiBlast_PDB 81.9240%-110 - C5 -4GSR - LDT2_MYCTU -
5 PsiBlast_PDB 81.6043%-108 - C5 -3VYN - LDT2_MYCTU -
41 HHSearch 81.3041%-106 - C5 -3VYP 2.6 LDT2_MYCTU
8 PsiBlast_PDB 81.2543%-112 - C5 -4QRB - LDT2_MYCTU -
4 PsiBlast_PDB 81.0150%-112 - C5 -4K73 - LDT3_MYCTU -
6 PsiBlast_PDB 80.9643%-112 - C5 -4QR7 - LDT2_MYCTU -