@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0118c: (2016-04-19 )
MTTRSASPCTVLTDGCHLVVDALKANDVDTIYGVVGIPITDLARAAQASGIRYIGFRHEASAGNAAAAAGFLTARPGVCLTTSGPGFLNGLPALANATTNCFPMIQISGSSSRPMVDLQRGDYQDLDQLNAARPFVKAAYRIGQVQDIGRGVARAIRTATSGRPGGVYLDIPGDVLGQAVEASAASGAIWRPVDPAPRLLPAPEAIDRALDVLAQAQRPLLVLSKGAAYAQADNVIREFVEHTGIPFLPMSMAKGLLPDSHPQSAAAARSLAMARADVVLLVGARLNWLLGNGESPQWSADAKFIQVDIEASEFDSNRPIVAPLTGDIGSVMSALLEAAADRSSVASAAWTGELADRKARNSAKMRRRLADDHHPMRFYNALGAIRSVLQRNPDVYVVNEGANALDLARNIIDMHLPRHRLDSGTWGVMGIGMGYAIAAAVETGRPVVAIEGDSAFGFSGMEFETICRYRLPVTVVILNNGGVYRGDEATIFRSAAPVWRHDPAPTVLNAHARHELIAEAFGGKGYHVSTPTELESALTDALASNGPSLIDCELDPADGVESGHLAKLNTTSAATPAISGDG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OXT_A_3(2JI7)
OXC_OXAFO
[Raw transfer]




OXT_B_10(2JI7)
OXC_OXAFO
[Raw transfer]




OXK_B_12(2JI6)
OXC_OXAFO
[Raw transfer]




OXK_A_6(2JI6)
OXC_OXAFO
[Raw transfer]




FYN_A_6(2JI8)
OXC_OXAFO
[Raw transfer]




FYN_B_11(2JI8)
OXC_OXAFO
[Raw transfer]




COA_A_6(2JIB)
OXC_OXAFO
[Raw transfer]




COA_B_11(2JIB)
OXC_OXAFO
[Raw transfer]




TZD_A_4(2C31)
OXC_OXAFO
[Raw transfer]




TPP_B_17(2Q27)
OXC_ECOLI
[Raw transfer]




TPP_A_7(2Q28)
OXC_ECOLI
[Raw transfer]




TPP_A_14(2Q27)
OXC_ECOLI
[Raw transfer]




TPP_B_12(2Q28)
OXC_ECOLI
[Raw transfer]




TPW_B_7(2JI9)
OXC_OXAFO
[Raw transfer]




ACO_B_6(2Q29)
OXC_ECOLI
[Raw transfer]




TPP_A_7(2Q29)
OXC_ECOLI
[Raw transfer]




TPW_A_3(2JI9)
OXC_OXAFO
[Raw transfer]




TPP_A_7(2Q28)
OXC_ECOLI
[Raw transfer]




TZD_A_4(2C31)
OXC_OXAFO
[Raw transfer]




MES_B_14(2Q28)
OXC_ECOLI
[Raw transfer]




21 PsiBlast_CBE 98.0659% -99 - C7 -2Q29 6.2 OXC_ECOLI
1 PsiBlast_PDB 98.0159%-100 - C7 -2Q27 7.2 OXC_ECOLI
22 PsiBlast_CBE 97.9959% -98 - C7 -2Q28 7.6 OXC_ECOLI
2 PsiBlast_PDB 97.8659% -98 - C7 -2Q28 7.6 OXC_ECOLI
23 PsiBlast_CBE 97.8459%-101 - C7 -2Q27 7.1 OXC_ECOLI
41 HHSearch 97.5659% -98 - C7 -2Q28 7.5 OXC_ECOLI
3 PsiBlast_PDB 97.4559% -98 - C7 -2Q29 7.5 OXC_ECOLI
24 PsiBlast_CBE 97.3655%-103 - C7 -2JIB 7.1 OXC_OXAFO
9 PsiBlast_PDB 97.2655%-102 - C7 -2JIB 7.2 OXC_OXAFO
27 PsiBlast_CBE 97.1855%-102 - C7 -2JI7 13.5 OXC_OXAFO
7 PsiBlast_PDB 96.9755%-103 - C7 -2JI8 7.9 OXC_OXAFO
5 PsiBlast_PDB 96.9755%-102 - C7 -2JI6 8.2 OXC_OXAFO
26 PsiBlast_CBE 96.9055%-102 - C7 -2JI8 7.8 OXC_OXAFO
28 PsiBlast_CBE 96.8755%-100 - C7 -2JI6 8.0 OXC_OXAFO
25 PsiBlast_CBE 96.7755%-105 - C7 -2JI9 7.6 OXC_OXAFO
6 PsiBlast_PDB 96.5655%-101 - C7 -2JI7 13.6 OXC_OXAFO
8 PsiBlast_PDB 96.5255%-104 - C7 -2JI9 7.5 OXC_OXAFO
4 PsiBlast_PDB 96.0755%-103 - C7 -2C31 7.2 OXC_OXAFO
43 HHSearch 94.3955%-100 * C7 *2C31 5.4 OXC_OXAFO
29 PsiBlast_CBE 93.2355% -84 - C- -2C31 - OXC_OXAFO -