@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0137c: (2016-04-19 )
MTSNQKAILAGGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQIHDPTTKDRQGNDRGTSYRSAIFYFDEQQKRIALDTIADVEASGLWPGKVVTEVSPAGDFWEAEPEHQDYLQRYPNGYTCHFVRPGWRLPRRTAESALRASLSPELGT

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DTT_A_2(1FVG)
MSRA_BOVIN
[Raw transfer]



DTT_A_2(1FVG)
MSRA_BOVIN
[Raw transfer]



DTT_A_2(1FVG)
MSRA_BOVIN
[Raw transfer]



BME_A_4(2J89)
?
[Raw transfer]



BME_A_4(2J89)
?
[Raw transfer]



SSM_A_2(3BQF)

[Raw transfer]



PGE_B_23(4D7L)
MSRA_CORDI
[Raw transfer]



PGE_A_13(4D7L)
MSRA_CORDI
[Raw transfer]



MHO_A_2(4LWM)
?
[Raw transfer]
31 HHSearch 94.10100%-103 - C2 -1NWA - MSRA_MYCTU -
1 PsiBlast_PDB 94.10100%-103 - C2 -1NWA - MSRA_MYCTU -
2 PsiBlast_PDB 87.3778%-103 - C2 -4GWB - MSRA3_RHIME -
32 HHSearch 86.3577%-103 - C2 -4GWB - MSRA3_RHIME -
39 HHSearch 71.1636% -93 - C2 -3E0M - MSAB1_STRPN -
17 PsiBlast_PDB 69.0141%-110 - C2 -4LWJ - ? -
10 PsiBlast_PDB 68.7036% -94 - C2 -3E0M - MSAB1_STRPN -
15 PsiBlast_PDB 68.1941%-113 - C2 -4LWM 2.4 ?
16 PsiBlast_PDB 67.9641%-111 - C2 -4LWK - ? -
54 Fugue 67.9039% -85 - C2 -1FVG 2.0 MSRA_BOVIN
28 PsiBlast_CBE 67.8041%-110 - C2 -4LWK - ? -
4 PsiBlast_PDB 67.5144% -91 - C2 -2GT3 - MSRA_ECOLI -
11 PsiBlast_PDB 67.4142%-116 - C2 -4U66 - ? -
20 PsiBlast_PDB 67.1140%-112 - C2 -4LWL - ? -
29 PsiBlast_CBE 66.8336% -94 - C2 -3PIL - MSRA_YEAST -
38 HHSearch 66.6238% -89 - C2 -4D7L 3.4 MSRA_CORDI
22 PsiBlast_CBE 66.3442% -86 - C2 -4D7L 2.5 MSRA_CORDI
12 PsiBlast_PDB 65.9938% -87 - C2 -1FVG 2.5 MSRA_BOVIN
7 PsiBlast_PDB 65.8138% -92 - C2 -3BQF 2.2
8 PsiBlast_PDB 65.6840% -96 - C2 -2J89 2.3 ?
37 HHSearch 64.4939% -94 - C2 -2J89 2.3 ?
36 HHSearch 63.8838% -83 - C2 -1FVG 1.4 MSRA_BOVIN