@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0155: (2016-04-20 )
MTDPQTQSTRVGVVAESGPDERRVALVPKAVASLVNRGVAVVVEAGAGERALLPDELYTAVGASIGDAWAADVVVKVAPPTAAEVGRLRGGQTLIGFLAPRNADNSIGALTQAGVQAFALEAIPRISRAQVMDALSSQANVSGYKAVLLAASESTRFFPMLTTAAGTVKPATVLVLGVGVAGLQALATAKRLGARTTGYDVRPEVADQVRSVGAQWLDLGISASGEGGYARELTDDERAQQQKALEEAISGFDVVITTALVPGRPAPTLVTAAAVEAMKPGSVVVDLAGETGGNCELTEPGRTVVKHDVTIAAPLNLPATMPEHASELYSKNITALLDLLIKDGRLAPDFDDEVIAQSCVTRGKDS

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_C_9(4J16)
?
[Raw transfer]



NAD_A_4(1NM5)
PNTAA_RHORT
[Raw transfer]



NAD_A_4(2FRD)
PNTAA_RHORT
[Raw transfer]



NAD_D_4(1HZZ)
PNTAA_RHORT
[Raw transfer]



NAD_A_4(2FSV)
PNTAA_RHORT
[Raw transfer]



TXD_A_9(2OO5)
PNTAA_RHORT
[Raw transfer]



NAD_C_3(1X14)
PNTA_ECOLI
[Raw transfer]



NAD_D_4(1U2D)
PNTAA_RHORT
[Raw transfer]



NAD_B_5(4J16)
?
[Raw transfer]



NAD_C_3(1X15)
PNTA_ECOLI
[Raw transfer]



APR_D_4(1U2G)
PNTAA_RHORT
[Raw transfer]



NAD_A_4(1U28)
PNTAA_RHORT
[Raw transfer]



NAD_A_5(2OOR)
PNTAA_RHORT
[Raw transfer]



SND_A_4(1PTJ)
PNTAA_RHORT
[Raw transfer]



APR_E_5(1U2G)
PNTAA_RHORT
[Raw transfer]



NAP_C_8(2OO5)
PNTAA_RHORT
[Raw transfer]



GOL_A_3(4IZI)
?
[Raw transfer]



GOL_B_8(4IZI)
?
[Raw transfer]



NAD_B_5(1NM5)
PNTAA_RHORT
[Raw transfer]



NAD_D_4(2FR8)
PNTAA_RHORT
[Raw transfer]



GOL_B_6(1PTJ)
PNTAA_RHORT
[Raw transfer]



NAP_C_6(1NM5)
PNTAA_RHORT
[Raw transfer]



GOL_A_8(4IZH)
?
[Raw transfer]



GOL_B_15(4IZH)
?
[Raw transfer]



NDP_F_6(1U2D)
PNTAA_RHORT
[Raw transfer]



NAP_C_5(1PTJ)
PNTAA_RHORT
[Raw transfer]



NAP_E_5(1HZZ)
PNTAA_RHORT
[Raw transfer]



NDP_F_6(1U2G)
PNTAA_RHORT
[Raw transfer]



NAP_C_6(1U28)
PNTAA_RHORT
[Raw transfer]



NAP_C_5(2FSV)
PNTAA_RHORT
[Raw transfer]



NAP_E_5(2FR8)
PNTAA_RHORT
[Raw transfer]



NAP_C_6(2FRD)
PNTAA_RHORT
[Raw transfer]



TXP_C_4(2OOR)
PNTAA_RHORT
[Raw transfer]



NAP_C_5(2BRU)
PNTA_ECOLI
[Raw transfer]
80 HHSearch 95.5072%-114 - C3 -3P2Y - ? -
1 PsiBlast_PDB 94.9772%-116 - C3 -3P2Y - ? -
85 HHSearch 86.6751%-109 - C3 -4IZH 3.2 ?
23 PsiBlast_CBE 85.9651%-112 - C3 -4J1T - ? -
9 PsiBlast_PDB 85.8445%-103 - C3 -1L7E - PNTAA_RHORT -
22 PsiBlast_CBE 85.1151%-111 - C3 -4J1T - ? -
38 PsiBlast_CBE 84.4445%-105 - C3 -1L7E - PNTAA_RHORT -
3 PsiBlast_PDB 84.3551%-112 - C3 -4IZH - ? -
25 PsiBlast_CBE 84.2851%-105 - C3 -4J16 8.5 ?
6 PsiBlast_PDB 84.2051%-110 - C3 -4J1T - ? -
16 PsiBlast_PDB 84.1645%-103 - C3 -1PTJ 8.0 PNTAA_RHORT
21 PsiBlast_CBE 84.0651%-108 - C3 -4O9U - ? -
5 PsiBlast_PDB 84.0551%-105 - C3 -4J16 Error ?
26 PsiBlast_CBE 83.9351%-111 - C3 -4IZI 2.1 ?
27 PsiBlast_CBE 83.9251%-110 - C3 -4IZH 2.2 ?
24 PsiBlast_CBE 83.8651%-109 - C3 -4J1T - ? -
8 PsiBlast_PDB 83.7945%-105 - C3 -1HZZ 7.5 PNTAA_RHORT
7 PsiBlast_PDB 83.7045%-106 - C3 -1L7D - PNTAA_RHORT -
81 HHSearch 83.5841%-107 - C3 -1X13 - PNTA_ECOLI -
17 PsiBlast_PDB 83.5544%-105 - C3 -2FRD 8.5 PNTAA_RHORT
4 PsiBlast_PDB 83.2051%-111 - C3 -4IZI 2.1 ?
47 PsiBlast_CBE 82.8541%-109 - C3 -1X14 7.9 PNTA_ECOLI
18 PsiBlast_PDB 82.4244%-103 - C3 -2FSV 9.5 PNTAA_RHORT
29 PsiBlast_CBE 82.3145% -98 - C3 -2OO5 2.4 PNTAA_RHORT
15 PsiBlast_PDB 82.0445%-102 - C3 -2OOR 8.6 PNTAA_RHORT
40 PsiBlast_CBE 81.9845%-108 - C3 -1PTJ 3.2 PNTAA_RHORT
28 PsiBlast_CBE 81.9845%-104 - C3 -2OOR 2.6 PNTAA_RHORT
12 PsiBlast_PDB 81.9845%-103 - C3 -1U2G 7.7 PNTAA_RHORT
14 PsiBlast_PDB 81.9645%-101 - C3 -2OO5 9.0 PNTAA_RHORT
10 PsiBlast_PDB 81.9645%-103 - C3 -1U28 8.6 PNTAA_RHORT
19 PsiBlast_PDB 81.9044%-105 - C3 -1NM5 8.4 PNTAA_RHORT
42 PsiBlast_CBE 81.6444%-109 - C3 -2FSV 3.1 PNTAA_RHORT
46 PsiBlast_CBE 81.6341%-111 - C3 -1X15 7.1 PNTA_ECOLI
39 PsiBlast_CBE 81.6245%-106 - C3 -1HZZ 1.9 PNTAA_RHORT
20 PsiBlast_PDB 81.5044%-106 - C3 -2FR8 4.8 PNTAA_RHORT
11 PsiBlast_PDB 81.3645%-102 - C3 -1U2D 9.2 PNTAA_RHORT
43 PsiBlast_CBE 81.3244%-107 - C3 -1NM5 4.8 PNTAA_RHORT
36 PsiBlast_CBE 81.1945% -96 - C3 -1U2D 2.3 PNTAA_RHORT
35 PsiBlast_CBE 81.0245%-108 - C3 -1U2G 6.8 PNTAA_RHORT
37 PsiBlast_CBE 81.0145%-108 - C3 -1U28 3.0 PNTAA_RHORT
41 PsiBlast_CBE 80.8844%-105 - C3 -2FRD 3.1 PNTAA_RHORT
44 PsiBlast_CBE 80.5544%-104 - C3 -2FR8 2.9 PNTAA_RHORT
45 PsiBlast_CBE 77.5141% -94 - C3 -2BRU 2.5 PNTA_ECOLI