@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0157: (2016-04-20 )
MNLHYLVEILYIISFSLFIYGLMGLTGPKTAVRGNLIAAAGMTIAVAATLVMIRHTSQWPLIIAGLVVGVVLGVPPARLTKMTAMPQLVAFFNGVGGGTVALIALSEFIDTTGFSAFQHGESPTVHIVVASLFAAIIGSISFWGSIVAFGKLQEIISGRPIGLGKAQQPINLLLLAVAVAAAVVIGLHAHPGSGGVALWWMIGLLVAAGVLGLMVVLPIGGADMPVVISMLNAMTGLSAAAAGLALNNTAMIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGGFGGGGVAPSGGGDDKHVKATSAADAAIQMAYANQVIVVPGYGLAVAQAQHAVKDLATLLEDRGVPVKYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMDDINDEFARTDVTIVIGANDVTNPAARNETSSPIYGMPILNVDKSRSVIVLKRSMNSGFAGIDNPLFYADGTTMLFGDAKKSVTEVSEELKAL

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_3(1PNQ)
PNTB_RHORT
[Raw transfer]




NDP_F_6(1U2G)

[Raw transfer]




NAP_B_4(1PNO)

[Raw transfer]




NAP_B_6(1DJL)

[Raw transfer]




NAP_C_5(2FSV)

[Raw transfer]




NAP_A_5(1DJL)
NNTM_HUMAN
[Raw transfer]




NAP_A_3(1PNO)
PNTB_RHORT
[Raw transfer]




NAP_C_8(2OO5)

[Raw transfer]




TXP_C_4(2OOR)

[Raw transfer]




NDP_F_6(1U2D)

[Raw transfer]




NAP_A_5(1DJL)
NNTM_HUMAN
[Raw transfer]




NDP_B_4(1PNQ)

[Raw transfer]




NAP_A_3(1PNO)
PNTB_RHORT
[Raw transfer]




NAP_C_5(2FSV)

[Raw transfer]




NAP_E_5(2FR8)

[Raw transfer]




NAP_C_9(4J16)
?
[Raw transfer]




NAP_E_5(1U31)
NNTM_HUMAN
[Raw transfer]




NAP_A_2(1D4O)

[Raw transfer]




NAP_C_6(2FRD)

[Raw transfer]




NAP_A_2(1D4O)

[Raw transfer]




NAP_C_6(1U28)

[Raw transfer]




NAP_F_6(1U31)

[Raw transfer]




NAP_A_2(1D4O)

[Raw transfer]




NAP_C_6(1NM5)

[Raw transfer]




NAP_E_5(1HZZ)

[Raw transfer]




NAP_C_5(1PTJ)

[Raw transfer]




TAP_E_5(1PT9)
NNTM_HUMAN
[Raw transfer]




TAP_F_6(1PT9)

[Raw transfer]




NAP_A_2(1E3T)

[Raw transfer]




NAP_C_5(2BRU)

[Raw transfer]




NAP_A_2(1E3T)

[Raw transfer]




NAP_C_5(2BRU)

[Raw transfer]




GOL_B_8(1DJL)

[Raw transfer]




GOL_H_8(1U31)

[Raw transfer]




APR_E_5(1U2G)

[Raw transfer]




NAD_B_5(2FRD)

[Raw transfer]




NAD_E_5(1U2D)

[Raw transfer]




1 PsiBlast_PDB 88.7846%-138 - C6 -4O9U - ? -
32 HHSearch 88.0448%-135 * C7 *4O9U - ? -
36 HHSearch 67.7057% -97 - C6 -1PNO 14.3 PNTB_RHORT
34 HHSearch 67.5358% -99 - C6 -2FSV 12.5
2 PsiBlast_PDB 67.1662%-102 - C6 -4J16 12.4 ?
12 PsiBlast_PDB 66.8759%-102 - C6 -2FSV 12.5
37 HHSearch 66.8461%-102 - C6 -4J1T - ? -
3 PsiBlast_PDB 66.7862%-104 - C6 -4J1T - ? -
21 PsiBlast_CBE 66.4162% -98 - C6 -4J1T - ? -
16 PsiBlast_PDB 66.3459% -98 - C6 -1PNO 14.3 PNTB_RHORT
23 PsiBlast_CBE 66.2359%-104 - C6 -1PNO 13.7
22 PsiBlast_CBE 66.0359%-103 - C6 -1PNQ 13.8
17 PsiBlast_PDB 65.7259% -94 - C6 -1PNQ 14.0 PNTB_RHORT
9 PsiBlast_PDB 65.0359%-102 - C6 -1U2G 13.1
18 PsiBlast_PDB 64.6460%-103 - C6 -1XLT - PNTB_RHORT -
7 PsiBlast_PDB 64.5559%-107 - C6 -1U28 13.0
14 PsiBlast_PDB 64.4861%-102 - C6 -2OO5 13.0
15 PsiBlast_PDB 64.4761%-102 - C6 -2OOR 12.5
6 PsiBlast_PDB 64.2259%-100 - C6 -1NM5 13.1
8 PsiBlast_PDB 64.1759% -99 - C6 -1U2D 12.5
10 PsiBlast_PDB 63.8659%-102 - C6 -2FR8 12.1
13 PsiBlast_PDB 63.0261%-105 - C6 -1PTJ 11.6
33 HHSearch 62.8745% -88 - C6 -1DJL 13.0 NNTM_HUMAN
11 PsiBlast_PDB 62.7959% -97 - C6 -2FRD 12.2
54 Fugue 62.1146% -91 * C6 *1D4O 12.7
35 HHSearch 62.0747% -91 - C6 -1D4O 12.7
5 PsiBlast_PDB 62.0459%-102 - C6 -1HZZ 11.2
30 PsiBlast_CBE 61.8347% -96 - C6 -1DJL 13.3
31 PsiBlast_CBE 61.4751% -95 - C6 -1D4O 12.7
26 PsiBlast_CBE 61.4047% -98 - C6 -1U31 12.6
27 PsiBlast_CBE 61.0647% -92 - C6 -1U31 12.3 NNTM_HUMAN
28 PsiBlast_CBE 61.0547% -97 - C6 -1PT9 12.7
20 PsiBlast_PDB 60.3147% -91 - C6 -1DJL 13.0 NNTM_HUMAN
29 PsiBlast_CBE 59.6547% -92 - C6 -1PT9 12.8 NNTM_HUMAN
19 PsiBlast_PDB 59.0955% -95 - C6 -2BRU 11.5
38 HHSearch 57.3753% -88 - C6 -2BRU 11.5
4 PsiBlast_PDB 56.2059% -89 - C6 -1E3T 5.8
53 Fugue 56.0959% -83 - C6 -1E3T 5.8