@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0185: (2016-04-20 )
MIGADVPRDSQRARVYAAEAFVRTLFDRVTAHGSPTVEFFGTQLTLPPEGRFGSVASVQRYVDDVLALPAVGQNWPTVSPVRVRARRAATAAHYENHGGTGTIAVPDRHTAGWAMRELVVLHEVAHHLCQVPPPHGPEFVATVCTLTELVMGPEVGHVFRVVYAQEGVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TRS_A_4(4JIX)
Y123_METJA
[Raw transfer]
26 Fugue 88.7323% -83 - C2 -4XGC - ? -
27 Fugue 82.6216% -75 - C3 -4Q7O - ? -
32 Fugue 76.5016% -64 - C3 -1IC8 - HNF1A_HUMAN -
33 Fugue 69.8720% -74 - C1 -2Y9W - ? -
3 PsiBlast_PDB 67.3432% -39 - C4 -3WI7 - DHAA_AGRFC -
4 PsiBlast_PDB 64.1532% -43 - C4 -3WIB - DHAA_AGRFC -
2 PsiBlast_PDB 61.4226% -25 - C4 -2MAS - IUNH_CRIFA -
25 Fugue 60.7014% -86 * C2 *2IAF - ? -
1 PsiBlast_PDB 60.1926% -52 - C4 -1MAS - IUNH_CRIFA -
5 HHSearch 58.7922% -82 - C4 -4JIU - ? -
34 Fugue 53.569% -46 * C3 *2JRO - ? -
7 HHSearch 52.3415% -65 - C4 -4QHJ - Y1213_METJA -
6 HHSearch 49.5420%-109 - C4 -4JIX 3.6 Y123_METJA
31 Fugue 49.408% -52 - C3 -1ASH - GLB_ASCSU -
21 HHSearch 39.6515% -6 - C3 -3DTE - IRRE_DEIDV -
28 Fugue 33.9420% -49 - C2 -2E12 - ? -
11 HHSearch 31.1926% -31 - C4 -3CQB - HTPX_VIBPA -
13 HHSearch 19.6114% 8 - C4 -1G12 - -
10 HHSearch 15.6144% 40 - C4 -3KHI - MTFA_KLEP7 -
22 HHSearch 15.4938% 26 - C4 -3MA2 - MMP14_HUMAN -