@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0194: (2016-04-20 )
MRTNCWWRLSGYVMRHRRDLLLGFGAALAGTVIAVLVPLVTKRVIDDAIAADHRPLAPWAVVLVAAAGATYLLMYVRRYYGGRIAHLVQHDLRMDAFQALLRWDGRQQDRWSSGQLIVRTTNDLQLVQALLFDVPNVLRHVLTLLLGVAVMTWLSVPLALLAVLLVPVIGLIAHRSRRLLAAATHCAQEHKAAVTGVVDAAVCGIRVVKAFGQEERETVKLVTASRALYAAQLRVARLNAHFGPLLQTLPALGQMAVFALGGWMAAQGSITVGTFVAFWACLTLLARPACDLAGMLTIAQQARAGAVRVLELIDSRPTLVDGTKPLSPEARLSLEFQRVSFGYVADRPVLREISLSVRAGETLAVVGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVRELTLDSLRSAIGLVPEDAVLFSGTIGANIAYGRPDATPEQIATAARAAHIEEFVNTLPDGYQTAVGARGLTLSGGQRQRIALARALLHQPRLLIMDDPTSAVDAVIECGIQEVLREAIADRTAVIFTRRRSMLTLADRVAVLDSGRLLDVGTPDEVWERCPRYRELLSPAPDLADDLVVAERSPVCRPVAGLGTKAAQHTNVHNPGPHDHPPGPDPLRRLLREFRGPLALSLLLVAVQTCAGLLPPLLIRHGIDVGIRRHVLSALWWAALAGTATVVIRWVVQWGSAMVAGYTGEQVLFRLRSVVFAHAQRLGLDAFEDDGDAQIVTAVTADVEAIVAFLRTGLVVAVISVVTLVGILVALLAIRARLVLLIFTTMPVLALATWQFRRASNWTYRRARHRLGTVTATLREYAAGLRIAQAFRAEYRGLQSYFAHSDDYRRLGVRGQRLLALYYPFVALLCSLATTLVLLDGAREVRAGVISVGALVTYLLYIELLYTPIGELAQMFDDYQRAAVAAGRIRSLLSTRTPSSPAARPVGTLRGEVVFDAVHYSYRTREVPALAGINLRIPAGQTVVFVGSTGSGKSTLIKLVARFYDPTHGTVRVDGCDLREFDVDGYRNRLGIVTQEQYVFAGTVRDAIAYGRPDATDAQVERAAREVGAHPMITALDNGYLHQVTAGGRNLSAGQLQLLALARARLVDPDILLLDEATVALDPATEAVVQRATLTLAARRTTLIVAHGLAIAEHADRIVVLEHGTVVEDGAHTELLAAGGHYSRLWAAHTRLCSPEITQLQCIDA

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(3QF4)
Y288_THEMA
[Raw transfer]




ANP_A_3(4Q4A)
Y288_THEMA
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ATP_D_5(3VX4)
?
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_2(5DGX)

[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




10 PsiBlast_PDB 87.9028%-113 - C1 -4M2T - MDR1A_MOUSE -
6 PsiBlast_PDB 87.7728%-113 - C1 -4M1M - MDR1A_MOUSE -
9 PsiBlast_PDB 87.6828%-113 - C1 -4M2S - MDR1A_MOUSE -
2 PsiBlast_PDB 85.3628%-108 - C1 -4LSG - MDR1A_MOUSE -
8 PsiBlast_PDB 84.8028%-109 - C1 -3G61 - MDR1A_MOUSE -
5 PsiBlast_PDB 84.6728%-110 - C1 -4KSD - MDR1A_MOUSE -
3 PsiBlast_PDB 84.5328%-110 - C1 -4KSB - MDR1A_MOUSE -
7 PsiBlast_PDB 84.4728%-109 - C1 -3G60 - MDR1A_MOUSE -
1 PsiBlast_PDB 84.4328%-106 * C1 *3G5U - MDR1A_MOUSE -
4 PsiBlast_PDB 84.3928%-109 - C1 -4KSC - MDR1A_MOUSE -
114 HHSearch 74.3726%-115 - C1 -4F4C - PGP1_CAEEL -
105 Fugue 73.2926%-115 - C1 -4F4C - PGP1_CAEEL -
11 PsiBlast_PDB 71.5228%-118 - C1 -4F4C - PGP1_CAEEL -
129 HHSearch 65.6728%-111 - C1 -3WMG - ? -
126 HHSearch 65.1931%-106 - C1 -4Q4H - Y288_THEMA -
119 HHSearch 64.8724%-108 - C1 -4RY2 - ? -
122 HHSearch 64.5427%-109 - C1 -4Q4H - ? -
24 PsiBlast_CBE 64.3132%-104 - C1 -3QF4 - ? -
15 PsiBlast_PDB 63.6630%-108 - C1 -3QF4 Error Y288_THEMA
17 PsiBlast_PDB 63.6330%-106 - C1 -4Q4H - Y288_THEMA -
16 PsiBlast_PDB 63.0430%-107 - C1 -4Q4A Error Y288_THEMA
71 PsiBlast_CBE 42.6236% -89 - C1 -3VX4 6.0 ?
72 PsiBlast_CBE 42.5636% -88 - C1 -3VX4 6.7 ?
54 PsiBlast_CBE 40.5039% -85 - C1 -2FGJ 6.3
62 PsiBlast_CBE 39.9939% -85 - C1 -1XEF 5.7 HLYBP_ECOLX
57 PsiBlast_CBE 39.5839% -84 - C1 -2FGJ 6.4 HLYBP_ECOLX
51 PsiBlast_CBE 39.5639% -83 - C1 -2FGK 6.6 HLYBP_ECOLX
49 PsiBlast_CBE 39.4839% -85 - C1 -2FGK 6.5
61 PsiBlast_CBE 39.4639% -86 - C1 -1XEF 6.5 HLYBP_ECOLX
45 PsiBlast_CBE 39.4040% -87 - C1 -2PMK 6.8
60 PsiBlast_CBE 39.3039% -85 - C1 -1XEF 6.5 HLYBP_ECOLX
58 PsiBlast_CBE 39.2639% -84 - C1 -2FFA 6.3
53 PsiBlast_CBE 39.2639% -85 - C1 -2FFB 6.2
46 PsiBlast_CBE 39.1940% -83 - C1 -2FF7 6.2
52 PsiBlast_CBE 38.8339% -82 - C1 -2FGK 6.6 HLYBP_ECOLX
76 PsiBlast_CBE 38.8136% -79 - C1 -2IXF 6.8 TAP1_RAT
48 PsiBlast_CBE 38.7740% -86 - C1 -3B5J 6.7
75 PsiBlast_CBE 38.4836% -77 - C1 -2IXF 6.9 TAP1_RAT
59 PsiBlast_CBE 38.4139% -83 - C1 -1XEF 6.4
44 PsiBlast_CBE 38.2537% -83 - C1 -5DGX 6.7
50 PsiBlast_CBE 38.2239% -80 - C1 -2FGK 6.1 HLYBP_ECOLX
55 PsiBlast_CBE 38.1539% -81 - C1 -2FGJ 6.4 HLYBP_ECOLX
56 PsiBlast_CBE 37.8839% -81 - C1 -2FGJ 6.6 HLYBP_ECOLX
96 PsiBlast_CBE 31.3932% -70 - C1 -3C4J 5.1 ?
94 PsiBlast_CBE 30.6332% -69 - C1 -3C41 5.9 ?
97 PsiBlast_CBE 30.4032% -65 - C1 -3C4J 6.5 ?
98 PsiBlast_CBE 30.3732% -70 - C1 -2Q0H 6.1 ?
95 PsiBlast_CBE 29.2832% -69 - C1 -3C41 5.6 ?
99 PsiBlast_CBE 28.5032% -65 - C1 -2Q0H 5.7 ?