@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0234c: (2016-04-20 )
MRSVTCSATLVLPVIEPTPADRRPRHLLLGSAGHVSGRLDTGRFVQTHPAKDVSVPIATINPATGETVKTFTAATDDEVDAAIARAHRRFADYRQTSFAQRARWANATADLLEAEADQAAAMMTLEMGKTLAAAKAEALKCAKGFRYYAENAEALLADEPADAAKVGASAAYGRYQPLGVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSGAVEAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWIA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_4(3VZ3)
?
[Raw transfer]



NDP_B_20(4ITA)
?
[Raw transfer]



NAP_B_6(3VZ3)
?
[Raw transfer]



NDP_B_18(4ITB)
?
[Raw transfer]



NDP_A_3(4ITB)
?
[Raw transfer]



NAP_A_3(4OHT)
?
[Raw transfer]



NAP_B_4(4OHT)
?
[Raw transfer]



SSN_B_6(4YWU)
?
[Raw transfer]



SSN_A_3(4YWU)
?
[Raw transfer]



SSN_A_3(4YWV)
?
[Raw transfer]



EDO_A_13(4ITA)
?
[Raw transfer]



EDO_A_9(4IT9)
?
[Raw transfer]



EDO_A_9(4ITA)
?
[Raw transfer]



SSN_B_8(4YWV)
?
[Raw transfer]



SSN_A_4(4YWV)
?
[Raw transfer]



EDO_B_26(4IT9)
?
[Raw transfer]
22 PsiBlast_CBE 99.5056% -84 - C3 -4ITA 8.6 ?
1 PsiBlast_PDB 99.3656% -85 - C3 -4IT9 2.4 ?
23 PsiBlast_CBE 99.3356% -85 - C3 -4IT9 3.1 ?
24 PsiBlast_CBE 99.3056% -86 - C3 -3VZ3 9.5 ?
6 PsiBlast_PDB 99.3056% -87 - C3 -3VZ3 8.9 ?
2 PsiBlast_PDB 99.0756% -85 - C3 -4ITA 3.3 ?
4 PsiBlast_PDB 98.9956% -87 - C3 -3VZ1 - ? -
21 PsiBlast_CBE 98.9156% -83 - C3 -4ITB 10.0 ?
3 PsiBlast_PDB 98.9156% -84 - C3 -4ITB 10.1 ?
5 PsiBlast_PDB 98.3756% -86 - C3 -3VZ2 - ? -
10 PsiBlast_PDB 89.8937% -77 - C3 -4OGD - ? -
27 PsiBlast_CBE 89.7337% -76 - C3 -4OHT 5.8 ?
26 PsiBlast_CBE 89.7037% -78 - C3 -4YWU 2.4 ?
25 PsiBlast_CBE 89.6737% -77 - C3 -4YWV 2.8 ?
11 PsiBlast_PDB 89.6037% -75 - C3 -4OHT 5.9 ?
7 PsiBlast_PDB 89.2344% -77 - C3 -3EFV - ? -
13 PsiBlast_PDB 88.9937% -75 - C3 -4YWV 2.4 ?
12 PsiBlast_PDB 88.3937% -76 - C3 -4YWU 1.9 ?
48 PsiBlast_CBE 87.6435% -75 - C3 -4FR8 - ALDH2_HUMAN -
9 PsiBlast_PDB 87.5241% -77 - C3 -3VZ0 - ? -