@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0252: (2016-04-21 )
MPTAGSSRAPAAAREIVVVGHGMVGHRLVEAVRARDADGSLRITVLAEEGDAAYDRVGLTSYTESWDRALLALPGNDYAGDQRVRLLLNTRVTQIDRATKSVVTAAGQRHRYDTLVLATGSYAFVPPVPGHDLPACHVYRTFDDLDAIRAGAQRTLDGGHTDGGVVIGGGLLGLEAANALRQFGLQTHVVEMMPRLMAQQIDEAGGALLARMIADLGIAVHVGTGTESIESVKHSDGSVWARVRLSDGEVIDAGVVIFAAGIRPRDELARAAGLAIGDRGGVLTDLSCRTSDPDIYAVGEVAAIDGRCYGLVGPGYTSAEVVADRLLDGSAEFPEADLSTKLKLLGVDVASFGDAMGATENCLEVVINDAVKRTYAKLVLSDDATTLLGGVLVGDASSYGVLRPMVGAELPGDPLALIAPAGSGAGAGALGVGALPDSAQICSCNNVTKGELKCAIADGCGDVPALKSCTAAGTSCGSCVPLLKQLLEAEGVEQSKALCEHFSQSRAELFEIITATEVRTFSGLLDRFGRGKGCDICKPVVASILASTGSDHILDGEQASLQDSNDHFLANIQKNGSYSVVPRVPGGDIKPEHLILIGQIAQDFGLYTKITGGQRIDLFGARVDQLPLIWQRLVDGGMESGHAYGKAVRTVKSCVGSDWCRYGQQDSVQLAIDLELRYRGLRAPHKIKLGVSGCARECAEARGKDVGVIATEKGWNLYVAGNGGMTPKHAQLLASDLDKETLIRYIDRFLIYYIRTADRLQRTAPWVESLGLDHVREVVCEDSLGLAEEFEAAMQRHVANYKCEWKGVLEDPDKLSRFVSFVNAPDAVDSTVTFTERAGRKVPVSIGIPRVRS

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEG_A_7(2V3A)
RURE_PSEAE
[Raw transfer]



FMT_A_10(4H4U)
?
[Raw transfer]



FMT_A_8(4H4V)
?
[Raw transfer]



FMT_A_7(4H4R)
?
[Raw transfer]



FMT_A_6(4H4X)
?
[Raw transfer]



FMT_A_6(4H4T)
?
[Raw transfer]



FMT_A_6(4H4P)
?
[Raw transfer]



FMT_A_6(4H4Z)
?
[Raw transfer]
50 HHSearch 92.3325% -97 - C3 -3NTD - ? -
1 PsiBlast_PDB 83.5531%-104 - C3 -3IWA - ? -
39 HHSearch 83.5327% -97 - C3 -2GQW - ? -
51 HHSearch 82.9427%-103 - C3 -3FG2 - ? -
38 HHSearch 82.6528%-101 - C3 -2V3A - RURE_PSEAE -
44 HHSearch 82.1726% -91 - C3 -3LXD - ? -
53 HHSearch 81.5724%-103 - C3 -3ICS - ? -
52 HHSearch 80.5428%-102 - C3 -3IWA - ? -
46 HHSearch 80.5127%-104 - C3 -1XHC - ? -
59 Fugue 80.5027% -88 - C3 -1D7Y - ? -
42 HHSearch 79.5322% -95 - C3 -1NHP - NAPE_ENTFA -
36 HHSearch 77.8224%-105 - C3 -3KLJ - NROR_CLOAB -
40 HHSearch 77.5724% -96 - C3 -1Q1R - CAMA_PSEPU -
37 HHSearch 77.3127% -93 * C3 *3EF6 - TODA_PSEP1 -
9 PsiBlast_PDB 76.8630% -91 - C3 -2V3A 2.7 RURE_PSEAE
10 PsiBlast_PDB 76.7930% -94 - C3 -2V3B - RURE_PSEAE -
24 PsiBlast_CBE 75.7933%-106 - C3 -4H4U 3.3 ?
16 PsiBlast_PDB 75.7133%-109 - C3 -2GR0 - ? -
20 PsiBlast_PDB 75.3933%-107 - C3 -2YVG - ? -
25 PsiBlast_CBE 74.7733%-108 - C3 -4H4T 3.3 ?
27 PsiBlast_CBE 74.5733%-110 - C3 -4H4P 3.4 ?
35 PsiBlast_CBE 74.1233%-109 - C3 -4H4V 3.4 ?
29 PsiBlast_CBE 73.5833%-109 - C3 -4H4Z 3.3 ?
33 PsiBlast_CBE 73.4333%-109 - C3 -4H4R 3.4 ?
31 PsiBlast_CBE 73.2233%-107 - C3 -4H4X 3.4 ?