@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0409: (2016-04-22 )
MSSTVLVINSGSSSLKFQLVEPVAGMSRAAGIVERIGERSSPVADHAQALHRAFKMLAEDGIDLQTCGLVAVGHRVVHGGTEFHQPTLLDDTVIGKLEELSALAPLHNPPAVLGIKVARRLLANVAHVAVFDTAFFHDLPPAAATYAIDRDVADRWHIRRYGFHGTSHQYVSERAAAFLGRPLDGLNQIVLHLGNGASASAIARGRPVETSMGLTPLEGLVMGTRSGDLDPGVISYLWRTARMGVEDIESMLNHRSGMLGLAGERDFRRLRLVIETGDRSAQLAYEVFIHRLRKYLGAYLAVLGHTDVVSFTAGIGENDAAVRRDALAGLQGLGIALDQDRNLGPGHGARRISSDDSPIAVLVVPTNEELAIARDCLRVLGGRRA

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4FWM)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E20)
TDCD_SALTY
[Raw transfer]




AQP_A_4(4FWN)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E1Z)
TDCD_SALTY
[Raw transfer]




ANP_A_2(4XH4)
TDCD_SALTY
[Raw transfer]




ADP_F_6(1G99)
ACKA_METTE
[Raw transfer]




ANP_A_2(4XH4)
TDCD_SALTY
[Raw transfer]




GTP_A_4(4FWQ)
TDCD_SALTY
[Raw transfer]




ANP_E_5(1X3N)
TDCD_SALTY
[Raw transfer]




CTP_A_6(4FWS)
TDCD_SALTY
[Raw transfer]




ANP_A_5(4XH1)
TDCD_SALTY
[Raw transfer]




AMP_B_8(4IJN)
ACKA_MYCS2
[Raw transfer]




GDP_A_4(4FWP)
TDCD_SALTY
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ADP_C_3(1X3M)
TDCD_SALTY
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




AMP_A_4(4IJN)
ACKA_MYCS2
[Raw transfer]




APC_A_3(4IZ9)
ACKA_MYCA1
[Raw transfer]




AMP_A_4(4IJN)
ACKA_MYCS2
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ADP_E_5(1TUU)
ACKA_METTE
[Raw transfer]




ADP_B_5(1TUY)
ACKA_METTE
[Raw transfer]




AMP_F_6(1TUU)
ACKA_METTE
[Raw transfer]




AMP_A_3(4FWK)
TDCD_SALTY
[Raw transfer]




5GP_A_5(4FWO)
TDCD_SALTY
[Raw transfer]




ADP_A_4(1TUY)
ACKA_METTE
[Raw transfer]




C5P_A_4(4FWR)
TDCD_SALTY
[Raw transfer]




PGE_B_6(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




EDO_A_2(4FWL)
TDCD_SALTY
[Raw transfer]




EDO_A_2(4FWQ)
TDCD_SALTY
[Raw transfer]




ACY_B_7(1TUY)
ACKA_METTE
[Raw transfer]




3 PsiBlast_PDB 98.0077%-125 - C6 -4IZ9 5.6 ACKA_MYCA1
42 HHSearch 97.3177%-122 - C6 -3R9P 2.0 ACKA_MYCPA
4 PsiBlast_PDB 97.0977%-121 - C6 -3R9P 2.0 ACKA_MYCPA
21 PsiBlast_CBE 96.7677%-121 - C6 -3R9P 2.6 ACKA_MYCPA
2 PsiBlast_PDB 96.6877%-126 - C6 -3P4I - ACKA_MYCA1 -
1 PsiBlast_PDB 94.4878%-123 - C6 -4DQ8 - ACKA_MYCMM -
46 HHSearch 91.1166%-118 - C6 -4IJN 6.5 ACKA_MYCS2
5 PsiBlast_PDB 90.9466%-118 - C6 -4IJN 6.5 ACKA_MYCS2
22 PsiBlast_CBE 90.1866%-116 - C6 -4IJN 6.3 ACKA_MYCS2
7 PsiBlast_PDB 85.5443%-109 - C6 -1TUY 5.4 ACKA_METTE
24 PsiBlast_CBE 84.7443%-108 - C6 -1TUU 4.9 ACKA_METTE
25 PsiBlast_CBE 84.7343%-110 - C6 -1G99 6.6 ACKA_METTE
38 HHSearch 84.5444%-104 - C6 -1G99 5.7 ACKA_METTE
6 PsiBlast_PDB 84.1343%-105 - C6 -1TUU 5.8 ACKA_METTE
23 PsiBlast_CBE 84.0243%-108 - C6 -1TUY 4.5 ACKA_METTE
45 HHSearch 83.8646%-107 * C6 *2IIR - ACKA_THEMA -
9 PsiBlast_PDB 83.8645%-110 - C6 -2IIR - ACKA_THEMA -
8 PsiBlast_PDB 83.8243%-104 - C6 -1G99 5.7 ACKA_METTE
58 Fugue 83.7044%-104 - C6 -1G99 5.7 ACKA_METTE
34 PsiBlast_CBE 81.0339%-101 - C6 -4XH1 5.6 TDCD_SALTY
32 PsiBlast_CBE 80.7139%-101 - C6 -4FWP 6.1 TDCD_SALTY
36 PsiBlast_CBE 80.6139% -98 - C6 -4FWL 2.1 TDCD_SALTY
15 PsiBlast_PDB 80.4839% -99 - C6 -1X3N 5.7 TDCD_SALTY
17 PsiBlast_PDB 80.3339%-100 - C6 -2E1Z 10.2 TDCD_SALTY
13 PsiBlast_PDB 80.0739% -99 - C6 -4XH4 6.8 TDCD_SALTY
29 PsiBlast_CBE 80.0539%-100 - C6 -4FWS 5.8 TDCD_SALTY
40 HHSearch 80.0339% -98 - C6 -4XH4 6.8 TDCD_SALTY
19 PsiBlast_PDB 79.9439%-100 - C6 -4FWK 5.6 TDCD_SALTY
33 PsiBlast_CBE 79.8239%-100 - C6 -4FWO 5.6 TDCD_SALTY
14 PsiBlast_PDB 79.7939%-100 - C6 -1X3M 4.7 TDCD_SALTY
31 PsiBlast_CBE 79.5639% -98 - C6 -4FWQ 5.9 TDCD_SALTY
18 PsiBlast_PDB 79.5239%-100 - C6 -2E20 9.6 TDCD_SALTY
30 PsiBlast_CBE 79.2539% -95 - C6 -4FWR 3.8 TDCD_SALTY
35 PsiBlast_CBE 79.0339% -99 - C6 -4FWM 6.3 TDCD_SALTY
20 PsiBlast_PDB 78.8739% -98 - C6 -4FWN 7.5 TDCD_SALTY