@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0468: (2016-04-22 )
MSDAIQRVGVVGAGQMGSGIAEVSARAGVEVTVFEPAEALITAGRNRIVKSLERAVSAGKVTERERDRALGLLTFTTDLNDLSDRQLVIEAVVEDEAVKSEIFAELDRVVTDPDAVLASNTSSIPIMKVAAATKQPQRVLGLHFFNPVPVLPLVELVRTLVTDEAAAARTEEFASTVLGKQVVRCSDRSGFVVNALLVPYLLSAIRMVEAGFATVEDVDKAVVAGLSHPMGPLRLSDLVGLDTLKLIADKMFEEFKEPHYGPPPLLLRMVEAGQLGKKSGRGFYTY

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_A_3(1F17)
HCDH_HUMAN
[Raw transfer]




NAD_C_3(1LSO)
HCDH_HUMAN
[Raw transfer]




NAD_C_7(4KUG)
?
[Raw transfer]




NAD_A_3(3HAD)
HCDH_HUMAN
[Raw transfer]




NAD_A_5(4KUG)
?
[Raw transfer]




NAI_B_4(1F17)
HCDH_HUMAN
[Raw transfer]




NAD_F_6(3HDH)
HCDH_PIG
[Raw transfer]




NAD_B_6(4KUG)
?
[Raw transfer]




NAD_D_4(1LSO)
HCDH_HUMAN
[Raw transfer]




NAD_B_4(3HAD)
HCDH_HUMAN
[Raw transfer]




NAD_E_5(3HDH)
HCDH_PIG
[Raw transfer]




NAD_D_8(4KUG)
?
[Raw transfer]




NAD_D_4(1LSJ)
HCDH_HUMAN
[Raw transfer]




NAD_C_3(1LSJ)
HCDH_HUMAN
[Raw transfer]




CAA_D_4(1F0Y)
HCDH_HUMAN
[Raw transfer]




CAA_C_3(1M76)
HCDH_HUMAN
[Raw transfer]




CAA_C_3(1M75)
HCDH_HUMAN
[Raw transfer]




CAA_D_4(1M76)
HCDH_HUMAN
[Raw transfer]




CAA_D_4(1IL0)
HCDH_HUMAN
[Raw transfer]




CAA_D_4(1M75)
HCDH_HUMAN
[Raw transfer]




CAA_C_3(1IL0)
HCDH_HUMAN
[Raw transfer]




CAA_C_3(1F0Y)
HCDH_HUMAN
[Raw transfer]




CAA_C_3(1IL0)
HCDH_HUMAN
[Raw transfer]




CAA_C_3(1F0Y)
HCDH_HUMAN
[Raw transfer]




30 PsiBlast_CBE 94.6541%-102 - C4 -4KUG 8.6 ?
114 HHSearch 93.9642% -98 - C4 -4R1N - ? -
22 PsiBlast_CBE 93.7741%-101 - C4 -4KUH - ? -
1 PsiBlast_PDB 93.6641% -98 - C4 -4KUH - ? -
2 PsiBlast_PDB 93.5541%-101 - C4 -4KUE - ? -
4 PsiBlast_PDB 93.4341%-101 - C4 -4KUG 8.8 ?
28 PsiBlast_CBE 93.3741%-100 - C4 -4KUG 8.5 ?
3 PsiBlast_PDB 93.2941% -99 - C4 -4R1N - ? -
26 PsiBlast_CBE 93.1441% -98 - C4 -4KUH - ? -
25 PsiBlast_CBE 93.1141% -99 - C4 -4KUH - ? -
29 PsiBlast_CBE 92.9941%-100 - C4 -4KUG 7.9 ?
27 PsiBlast_CBE 92.9641%-100 - C4 -4KUH - ? -
10 PsiBlast_PDB 92.7441%-107 - C4 -1F14 - HCDH_HUMAN -
12 PsiBlast_PDB 92.2240%-105 - C4 -3HDH 9.3 HCDH_PIG
23 PsiBlast_CBE 92.1841% -95 - C4 -4KUH - ? -
24 PsiBlast_CBE 92.1341% -97 - C4 -4KUH - ? -
13 PsiBlast_PDB 92.1341%-103 - C4 -3HAD 8.8 HCDH_HUMAN
8 PsiBlast_PDB 92.0041% -99 - C4 -1F0Y 5.8 HCDH_HUMAN
17 PsiBlast_PDB 91.9540%-104 - C4 -1LSO 9.2 HCDH_HUMAN
53 PsiBlast_CBE 91.8940% -97 - C4 -1IL0 5.5 HCDH_HUMAN
11 PsiBlast_PDB 91.8741%-106 - C4 -1F17 6.7 HCDH_HUMAN
51 PsiBlast_CBE 91.6241%-105 - C4 -3HAD 8.7 HCDH_HUMAN
18 PsiBlast_PDB 91.6040%-102 - C4 -1M75 5.6 HCDH_HUMAN
48 PsiBlast_CBE 91.5941%-106 - C4 -1F17 8.9 HCDH_HUMAN
15 PsiBlast_PDB 91.5540%-109 - C4 -1LSJ 6.8 HCDH_HUMAN
56 PsiBlast_CBE 91.4340%-103 - C4 -1M75 5.1 HCDH_HUMAN
47 PsiBlast_CBE 91.3341% -98 - C4 -1F0Y 6.0 HCDH_HUMAN
14 PsiBlast_PDB 91.3040% -98 - C4 -1IL0 5.6 HCDH_HUMAN
55 PsiBlast_CBE 91.1540%-107 - C4 -1LSO 7.9 HCDH_HUMAN
16 PsiBlast_PDB 90.7140% -99 - C4 -1M76 4.9 HCDH_HUMAN
52 PsiBlast_CBE 90.6740%-102 - C4 -1LSJ 7.3 HCDH_HUMAN
103 Fugue 90.5940% -91 - C4 -1IL0 5.7 HCDH_HUMAN
54 PsiBlast_CBE 90.5840%-100 - C4 -1M76 5.2 HCDH_HUMAN
50 PsiBlast_CBE 90.0940%-102 * C4 *3HDH 8.9 HCDH_PIG
117 HHSearch 89.7340% -92 - C4 -1F0Y 5.8 HCDH_HUMAN