@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0478: (2016-04-23 )
MLGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HPD_B_6(1UB3)
DEOC_THET8
[Raw transfer]




HPD_A_5(1UB3)
DEOC_THET8
[Raw transfer]




HPD_D_8(1UB3)
DEOC_THET8
[Raw transfer]




HPD_C_7(1UB3)
DEOC_THET8
[Raw transfer]




HPD_A_5(1UB3)
DEOC_THET8
[Raw transfer]




GOL_A_7(3R13)
DEOC_THEMA
[Raw transfer]




HPD_A_3(1JCL)
DEOC_ECOLI
[Raw transfer]




CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]




CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]




HPD_B_4(1JCL)
DEOC_ECOLI
[Raw transfer]




HPD_A_3(1JCL)
DEOC_ECOLI
[Raw transfer]




HPD_A_3(1JCJ)
DEOC_ECOLI
[Raw transfer]




HPD_B_4(1JCJ)
DEOC_ECOLI
[Raw transfer]




UNL_B_7(3NG3)
DEOC_MYCA1
[Raw transfer]




UNL_C_9(3NG3)
DEOC_MYCA1
[Raw transfer]




UNL_A_6(3NG3)
DEOC_MYCA1
[Raw transfer]




ACY_B_3(4XBK)
?
[Raw transfer]




UNL_D_12(3NG3)
DEOC_MYCA1
[Raw transfer]




UNL_B_7(3NDO)
?
[Raw transfer]




UNL_A_4(3NDO)
?
[Raw transfer]




UNL_A_4(3NDO)
?
[Raw transfer]




UNL_A_5(5C5Y)
?
[Raw transfer]




ACY_B_4(4XBK)
?
[Raw transfer]




UNL_D_11(5C5Y)
?
[Raw transfer]




UNL_A_5(5C5Y)
?
[Raw transfer]




UNL_C_10(5C5Y)
?
[Raw transfer]




UNL_B_8(5C5Y)
?
[Raw transfer]




UNL_A_3(5C2X)
?
[Raw transfer]




UNL_B_5(5C2X)
?
[Raw transfer]




1 PsiBlast_PDB 97.1982%-117 - C2 -3NG3 2.9 DEOC_MYCA1
23 PsiBlast_CBE 96.3882%-115 - C2 -3NG3 2.9 DEOC_MYCA1
21 PsiBlast_CBE 95.1582%-117 - C2 -3NG3 3.3 DEOC_MYCA1
22 PsiBlast_CBE 93.9382%-117 - C2 -3NG3 3.2 DEOC_MYCA1
24 PsiBlast_CBE 93.1770%-119 - C2 -3NDO 2.9 ?
56 HHSearch 93.1270%-117 - C2 -3NDO 2.9 ?
2 PsiBlast_PDB 92.5970%-117 - C2 -3NDO 2.9 ?
57 HHSearch 84.6245%-115 - C2 -3NGJ - ? -
54 HHSearch 84.2243%-109 * C2 *3R12 2.8 DEOC_THEMA
5 PsiBlast_PDB 83.9945%-114 - C2 -4XBK - ? -
25 PsiBlast_CBE 83.7143%-109 - C2 -3NGJ - ? -
4 PsiBlast_PDB 83.4745%-111 - C2 -4XBS - ? -
26 PsiBlast_CBE 83.3643%-108 - C2 -3NGJ - ? -
27 PsiBlast_CBE 83.0243%-110 - C2 -3NGJ - ? -
28 PsiBlast_CBE 82.9345%-110 - C2 -4XBK 3.4 ?
3 PsiBlast_PDB 82.6443%-108 - C2 -3NGJ - ? -
53 HHSearch 82.3041%-110 - C2 -3OA3 - ? -
12 PsiBlast_PDB 81.3838% -99 - C2 -1N7K - DEOC_AERPE -
55 HHSearch 80.1345%-102 - C2 -1UB3 3.9 DEOC_THET8
7 PsiBlast_PDB 79.2541%-101 - C2 -3R13 2.5 DEOC_THEMA
6 PsiBlast_PDB 79.0141%-101 - C2 -3R12 2.9 DEOC_THEMA
29 PsiBlast_CBE 76.0945% -96 - C2 -1UB3 4.0 DEOC_THET8
31 PsiBlast_CBE 75.9145% -97 - C2 -1UB3 3.6 DEOC_THET8
50 HHSearch 75.9033%-101 - C2 -5C5Y 3.0 ?
30 PsiBlast_CBE 75.7945% -96 - C2 -1UB3 3.8 DEOC_THET8
9 PsiBlast_PDB 75.6045% -94 - C2 -1UB3 3.9 DEOC_THET8
68 Fugue 74.4932% -92 - C2 -1JCL 2.8 DEOC_ECOLI
42 PsiBlast_CBE 67.4834% -97 - C2 -1JCL 2.0 DEOC_ECOLI
20 PsiBlast_PDB 67.3333% -97 - C2 -1JCJ 3.1 DEOC_ECOLI
18 PsiBlast_PDB 67.0734% -98 - C2 -1JCL 1.8 DEOC_ECOLI
43 PsiBlast_CBE 66.5833% -96 - C2 -1JCJ 2.4 DEOC_ECOLI
38 PsiBlast_CBE 53.5034% -78 - C2 -5C5Y 2.8 ?
16 PsiBlast_PDB 53.2834% -75 - C2 -5C5Y 2.8 ?
40 PsiBlast_CBE 53.2234% -77 - C2 -5C5Y 2.8 ?
39 PsiBlast_CBE 53.0434% -76 - C2 -5C5Y 2.8 ?
15 PsiBlast_PDB 52.2634% -70 - C2 -5C2X 2.3 ?
41 PsiBlast_CBE 52.1834% -70 - C2 -5C2X 2.3 ?