@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0484c: (2016-04-23 )
MTTIGTRKRVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALANQIGGTAIVADVTDDAAVEALARALSRVDVLVNNAGGAKGLQFVADADLEHWRWMWDTNVLGTLRVTRALLPKLIDSGDGLIVTVTSIAAIEVYDGGAGYTAAKHAQGALHRTLRGELLGKPVRLTEIAPGAVETEFSLVRFDGDQQRADAVYAGMTPLVAADVAEVIGFVATRPSHVNLDQIVIRPRDQASASRRATHPVR

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_D_8(3RKU)
YM71_YEAST
[Raw transfer]



NAP_A_5(3RKU)
YM71_YEAST
[Raw transfer]



NAP_C_7(3RKU)
YM71_YEAST
[Raw transfer]



NAP_B_6(3RKU)
YM71_YEAST
[Raw transfer]



NDP_C_9(2JAP)
?
[Raw transfer]



NAP_A_5(3P19)
?
[Raw transfer]



NDP_D_11(2JAP)
?
[Raw transfer]



NAP_C_7(3P19)
?
[Raw transfer]



NDP_A_5(2JAP)
?
[Raw transfer]



NDP_B_7(2JAP)
?
[Raw transfer]



NAP_B_6(3P19)
?
[Raw transfer]



NDP_A_5(2JAH)
?
[Raw transfer]



NAP_D_8(3P19)
?
[Raw transfer]



GOL_C_13(3O4R)
DHRS4_HUMAN
[Raw transfer]



CHO_B_7(1FMC)
HDHA_ECOLI
[Raw transfer]



MPD_A_21(4H15)
?
[Raw transfer]
24 PsiBlast_CBE 89.8337% -95 - C1 -3ASV - ? -
22 PsiBlast_CBE 89.7337% -92 - C1 -3ASV - ? -
21 PsiBlast_CBE 89.5437% -93 - C1 -3ASV - ? -
3 PsiBlast_PDB 89.2537% -94 - C1 -3ASV - ? -
25 PsiBlast_CBE 89.1637% -94 - C1 -3ASV - ? -
23 PsiBlast_CBE 88.4737% -94 - C1 -3ASV - ? -
32 PsiBlast_CBE 87.3934%-103 - C1 -1XG5 - DHR11_HUMAN -
6 PsiBlast_PDB 86.1534%-101 - C1 -1XG5 - DHR11_HUMAN -
33 PsiBlast_CBE 86.1334%-102 - C1 -1XG5 - DHR11_HUMAN -
40 PsiBlast_CBE 84.9737%-114 - C1 -3TFO - ? -
39 PsiBlast_CBE 84.6237%-113 - C1 -3TFO - ? -
29 PsiBlast_CBE 84.5439%-101 - C1 -2JAP 14.1 ?
31 PsiBlast_CBE 83.5739%-103 - C1 -2JAP 13.9 ?
30 PsiBlast_CBE 82.9939%-102 - C1 -2JAP 13.8 ?
5 PsiBlast_PDB 82.8939%-100 - C1 -2JAP 13.9 ?
2 PsiBlast_PDB 82.8237% -98 - C1 -3ASU - ? -
9 PsiBlast_PDB 82.3539%-101 - C1 -2JAH 14.2 ?
26 PsiBlast_CBE 80.9537% -92 - C1 -3RKU 13.1 YM71_YEAST
28 PsiBlast_CBE 80.3437% -89 - C1 -3RKU 13.1 YM71_YEAST
4 PsiBlast_PDB 80.0237% -89 - C1 -3RKU 12.9 YM71_YEAST
27 PsiBlast_CBE 79.5037% -89 - C1 -3RKU 13.0 YM71_YEAST
38 PsiBlast_CBE 78.0733%-106 - C1 -3P19 13.6 ?
37 PsiBlast_CBE 76.6033%-105 - C1 -3P19 13.6 ?
36 PsiBlast_CBE 75.7833%-102 - C1 -3P19 14.0 ?
8 PsiBlast_PDB 75.7033% -99 - C1 -3P19 14.2 ?
103 PsiBlast_CBE 61.1533% -99 - C1 -1FMC 3.5 HDHA_ECOLI
92 PsiBlast_CBE 57.9631% -85 - C1 -3O4R 2.1 DHRS4_HUMAN