@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0489: (2016-04-23 )
MANTGSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRGGTYLDPEAAAAGAAAVAGQGRG

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VO3_A_2(1E59)
GPMA_ECOLI
[Raw transfer]



BHC_H_8(1BQ4)
PMG1_YEAST
[Raw transfer]



DG2_A_3(3FDZ)
GPMA_BURP1
[Raw transfer]



DG2_A_4(2H4Z)
PMGE_HUMAN
[Raw transfer]



3PG_A_5(3GP5)
GPMA_BURP1
[Raw transfer]



DG2_B_3(2H4Z)
PMGE_HUMAN
[Raw transfer]



3PG_B_9(3GP5)
GPMA_BURP1
[Raw transfer]



IHP_J_10(1BQ3)
PMG1_YEAST
[Raw transfer]



IHP_I_9(1BQ3)
PMG1_YEAST
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



3PG_B_6(2F90)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H4X)
PMGE_HUMAN
[Raw transfer]



3PG_A_5(2F90)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H52)
PMGE_HUMAN
[Raw transfer]



3PG_B_4(2A9J)
PMGE_HUMAN
[Raw transfer]



3PG_B_4(2H52)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2A9J)
PMGE_HUMAN
[Raw transfer]



GOL_D_7(1RII)
GPMA_MYCTU
[Raw transfer]



3PG_B_4(2H4X)
PMGE_HUMAN
[Raw transfer]



GOL_B_6(1RII)
GPMA_MYCTU
[Raw transfer]



CIT_A_4(1YFK)
PGAM1_HUMAN
[Raw transfer]



GOL_B_10(3GW8)
GPMA_BURP1
[Raw transfer]



GOL_A_4(3GW8)
GPMA_BURP1
[Raw transfer]



CIT_B_5(1YFK)
PGAM1_HUMAN
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_J_10(1QHF)
PMG1_YEAST
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]
114 HHSearch 97.54100% -91 - C2 -1RII 2.4 GPMA_MYCTU
1 PsiBlast_PDB 97.54100% -91 - C2 -1RII 2.4 GPMA_MYCTU
22 PsiBlast_CBE 96.35100% -89 - C2 -1RII - GPMA_MYCTU -
23 PsiBlast_CBE 94.51100% -89 - C2 -1RII 2.2 GPMA_MYCTU
21 PsiBlast_CBE 94.23100% -89 - C2 -1RII 2.4 GPMA_MYCTU
2 PsiBlast_PDB 93.7688% -91 - C2 -4EO9 - GPMA_MYCLB -
115 HHSearch 93.4288% -90 - C2 -4EO9 - GPMA_MYCLB -
24 PsiBlast_CBE 84.6863% -89 - C2 -5PGM - PMG1_YEAST -
29 PsiBlast_CBE 84.3063% -90 - C2 -5PGM - PMG1_YEAST -
26 PsiBlast_CBE 83.8963% -90 - C2 -5PGM - PMG1_YEAST -
28 PsiBlast_CBE 83.7563% -90 - C2 -5PGM - PMG1_YEAST -
31 PsiBlast_CBE 83.6663% -93 - C2 -1BQ4 - PMG1_YEAST -
6 PsiBlast_PDB 83.2563% -91 - C2 -5PGM - PMG1_YEAST -
34 PsiBlast_CBE 83.1663% -90 - C2 -1BQ3 - PMG1_YEAST -
27 PsiBlast_CBE 83.1163% -91 - C2 -5PGM - PMG1_YEAST -
25 PsiBlast_CBE 82.7463% -88 - C2 -5PGM - PMG1_YEAST -
4 PsiBlast_PDB 82.7463% -90 - C2 -1BQ3 2.8 PMG1_YEAST
35 PsiBlast_CBE 82.7263% -90 - C2 -1BQ3 - PMG1_YEAST -
30 PsiBlast_CBE 82.1763% -88 - C2 -5PGM - PMG1_YEAST -
3 PsiBlast_PDB 81.8763% -91 - C2 -4PGM - PMG1_YEAST -
36 PsiBlast_CBE 81.4463% -86 - C2 -1BQ3 3.4 PMG1_YEAST
7 PsiBlast_PDB 81.3063% -85 - C2 -1QHF 3.4 PMG1_YEAST
33 PsiBlast_CBE 80.9863% -88 - C2 -1BQ4 4.3 PMG1_YEAST
123 HHSearch 80.8563% -82 - C2 -1QHF 3.4 PMG1_YEAST
18 PsiBlast_PDB 80.6149% -88 - C2 -4EMB 3.6 GPMA_BORBU
104 Fugue 80.5660% -85 - C2 -1QHF 4.2 PMG1_YEAST
37 PsiBlast_CBE 79.9763% -82 - C2 -1QHF 2.7 PMG1_YEAST
120 HHSearch 78.9548% -82 - C2 -4EMB 3.6 GPMA_BORBU
65 PsiBlast_CBE 78.7047% -83 - C2 -1YFK 3.2 PGAM1_HUMAN
64 PsiBlast_CBE 76.3647% -86 - C2 -1YFK 2.4 PGAM1_HUMAN
73 PsiBlast_CBE 74.6842% -80 - C2 -2F90 5.4 PMGE_HUMAN
75 PsiBlast_CBE 74.5542% -82 - C2 -2A9J 5.5 PMGE_HUMAN
71 PsiBlast_CBE 73.9642% -81 - C2 -2H4X 5.1 PMGE_HUMAN
40 PsiBlast_CBE 73.8657% -92 - C2 -3GP5 4.8 GPMA_BURP1
19 PsiBlast_PDB 73.5051% -85 - C2 -1E59 5.3 GPMA_ECOLI
13 PsiBlast_PDB 73.3457% -92 - C2 -3GW8 3.8 GPMA_BURP1
10 PsiBlast_PDB 73.2857% -88 - C2 -3FDZ 5.5 GPMA_BURP1
69 PsiBlast_CBE 73.2442% -83 - C2 -2H4Z 5.4 PMGE_HUMAN
12 PsiBlast_PDB 73.2457% -90 - C2 -3GP5 4.4 GPMA_BURP1
70 PsiBlast_CBE 73.1642% -81 - C2 -2H4X 5.1 PMGE_HUMAN
72 PsiBlast_CBE 72.8642% -80 - C2 -2F90 5.1 PMGE_HUMAN
68 PsiBlast_CBE 72.7442% -79 - C2 -2H4Z 5.8 PMGE_HUMAN
39 PsiBlast_CBE 72.5157% -92 - C2 -3GW8 2.6 GPMA_BURP1
66 PsiBlast_CBE 71.9942% -80 - C2 -2H52 4.1 PMGE_HUMAN
67 PsiBlast_CBE 71.9142% -82 - C2 -2H52 5.0 PMGE_HUMAN
74 PsiBlast_CBE 71.6242% -78 - C2 -2A9J 3.8 PMGE_HUMAN