@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0524: (2016-04-23 )
MGSTEQATSRVRGAARTSAQLFEAACSVIPGGVNSPVRAFTAVGGTPRFITEAHGCWLIDADGNRYVDLVCSWGPMILGHAHPAVVEAVAKAAARGLSFGAPTPAETQLAGEIIGRVAPVERIRLVNSGTEATMSAVRLARGFTGRAKIVKFSGCYHGHVDALLADAGSGVATLGLCDDPQRPASPRSQSSRGLPSSPGVTGAAAADTIVLPYNDIDAVQQTFARFGEQIAAVITEASPGNMGVVPPGPGFNAALRAITAEHGALLILDEVMTGFRVSRSGWYGIDPVPADLFAFGKVMSGGMPAAAFGGRAEVMQRLAPLGPVYQAGTLSGNPVAVAAGLATLRAADDAVYTALDANADRLAGLLSEALTDAVVPHQISRAGNMLSVFFGETPVTDFASARASQTWRYPAFFHAMLDAGVYPPCSAFEAWFVSAALDDAAFGRIANALPAAARAAAQERPA

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PXG_A_3(3FQ7)
GSA_SYNP6
[Raw transfer]




EA5_A_3(2HP1)
GSA_SYNP6
[Raw transfer]




KE4_A_3(2HP2)
GSA_SYNP6
[Raw transfer]




PXG_B_4(3FQ7)
GSA_SYNP6
[Raw transfer]




PMP_A_3(2HOZ)
GSA_SYNP6
[Raw transfer]




PMP_A_2(3BS8)
GSA_BACSU
[Raw transfer]




PMP_B_4(2HOZ)
GSA_SYNP6
[Raw transfer]




PMP_E_5(3GSB)
GSA_SYNP6
[Raw transfer]




PMP_B_5(3FQA)
GSA_SYNP6
[Raw transfer]




PMP_A_3(2GSA)
GSA_SYNP6
[Raw transfer]




PMP_C_8(2ZSM)
GSA_AERPE
[Raw transfer]




PMP_A_3(3FQA)
GSA_SYNP6
[Raw transfer]




PMP_B_4(3FQ8)
GSA_SYNP6
[Raw transfer]




PMP_B_6(2ZSM)
GSA_AERPE
[Raw transfer]




PMP_A_4(2E7U)
GSA_THET8
[Raw transfer]




PMP_A_3(3FQ8)
GSA_SYNP6
[Raw transfer]




PMP_A_4(2E7U)
GSA_THET8
[Raw transfer]




PMP_A_3(3FQ8)
GSA_SYNP6
[Raw transfer]




PLR_A_3(3USF)
GSA_SYNE7
[Raw transfer]




PMP_A_2(2EPJ)
GSA_AERPE
[Raw transfer]




PMP_A_2(2EPJ)
GSA_AERPE
[Raw transfer]




PMP_C_3(3GSB)
GSA_SYNP6
[Raw transfer]




PMP_A_2(2ZSL)
GSA_AERPE
[Raw transfer]




PLR_B_5(3USF)
GSA_SYNE7
[Raw transfer]




PLP_B_4(2GSA)
GSA_SYNP6
[Raw transfer]




PLP_B_4(2HP2)
GSA_SYNP6
[Raw transfer]




PMP_A_4(2ZSM)
GSA_AERPE
[Raw transfer]




PLP_B_4(4GSA)
GSA_SYNP6
[Raw transfer]




PLP_A_3(4GSA)
GSA_SYNP6
[Raw transfer]




PLR_A_3(2CFB)
GSA_THEEB
[Raw transfer]




PLP_B_4(2HP1)
GSA_SYNP6
[Raw transfer]




PLP_A_3(4AO9)
BFAT_VARPD
[Raw transfer]




PLP_B_4(4AO9)
BFAT_VARPD
[Raw transfer]




HOZ_A_4(3USF)
GSA_SYNE7
[Raw transfer]




GAB_D_4(3GSB)
GSA_SYNP6
[Raw transfer]




HOZ_B_5(2HP2)
GSA_SYNP6
[Raw transfer]




GAB_A_4(3FQA)
GSA_SYNP6
[Raw transfer]




105 HHSearch 95.5151%-108 - C2 -5I92 - ? -
3 PsiBlast_PDB 94.7149%-105 - C2 -2E7U 4.3 GSA_THET8
1 PsiBlast_PDB 93.4147%-100 - C2 -3BS8 3.9 GSA_BACSU
21 PsiBlast_CBE 91.9949%-108 - C2 -5I92 - ? -
2 PsiBlast_PDB 91.3449%-110 - C2 -5I92 - ? -
111 HHSearch 91.2150% -96 - C2 -2E7U 4.3 GSA_THET8
120 Fugue 87.7445% -98 - C2 -2GSA 5.1 GSA_SYNP6
112 HHSearch 85.9845%-100 - C2 -3FQ8 4.9 GSA_SYNP6
30 PsiBlast_CBE 85.2146%-102 - C2 -3FQ7 5.9 GSA_SYNP6
31 PsiBlast_CBE 85.1346%-104 - C2 -3FQA 4.4 GSA_SYNP6
11 PsiBlast_PDB 85.1146%-102 - C2 -3FQ7 5.6 GSA_SYNP6
8 PsiBlast_PDB 84.9846%-105 - C2 -2HOZ 4.4 GSA_SYNP6
117 HHSearch 84.6243% -97 - C2 -2EPJ 4.8 GSA_AERPE
24 PsiBlast_CBE 84.5546%-104 - C2 -2GSA 3.4 GSA_SYNP6
22 PsiBlast_CBE 84.2946%-103 - C2 -4GSA 3.1 GSA_SYNP6
27 PsiBlast_CBE 84.2646%-105 - C2 -2HOZ 4.4 GSA_SYNP6
34 PsiBlast_CBE 84.1444%-102 - C2 -2ZSM 4.0 GSA_AERPE
32 PsiBlast_CBE 83.7345%-104 - C2 -3FQ8 4.0 GSA_SYNP6
13 PsiBlast_PDB 83.5346%-103 - C2 -3FQA 4.1 GSA_SYNP6
16 PsiBlast_PDB 83.4644% -99 - C2 -2EPJ 4.8 GSA_AERPE
17 PsiBlast_PDB 83.4044% -99 - C2 -2ZSL 4.8 GSA_AERPE
23 PsiBlast_CBE 82.7546%-100 - C2 -3GSB 4.8 GSA_SYNP6
14 PsiBlast_PDB 82.6645%-101 - C2 -3FQ8 4.9 GSA_SYNP6
33 PsiBlast_CBE 82.6344% -98 - C2 -2ZSM 4.2 GSA_AERPE
9 PsiBlast_PDB 82.4746%-100 - C2 -2HP1 5.4 GSA_SYNP6
5 PsiBlast_PDB 82.3846% -99 - C2 -4GSA 3.1 GSA_SYNP6
12 PsiBlast_PDB 82.2846% -97 - C2 -3USF 4.4 GSA_SYNE7
10 PsiBlast_PDB 82.2346%-102 - C2 -2HP2 5.1 GSA_SYNP6
25 PsiBlast_CBE 82.1446%-101 - C2 -2HP2 3.7 GSA_SYNP6
18 PsiBlast_PDB 82.0544% -98 - C2 -2ZSM 4.3 GSA_AERPE
6 PsiBlast_PDB 82.0446%-102 - C2 -3GSB 4.4 GSA_SYNP6
29 PsiBlast_CBE 80.7646%-108 - C2 -3USF 4.3 GSA_SYNE7
45 PsiBlast_CBE 80.2131%-109 - C2 -4AO9 3.0 BFAT_VARPD
46 PsiBlast_CBE 79.6731%-107 - C2 -4AO9 3.1 BFAT_VARPD
26 PsiBlast_CBE 78.9546%-106 - C2 -2HP1 3.8 GSA_SYNP6
15 PsiBlast_PDB 78.1246%-106 - C2 -2CFB 2.8 GSA_THEEB