@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0568: (2016-04-23 )
MSGTSSMGLPPGPRLSGSVQAVLMLRHGLRFLTACQRRYGSVFTLHVAGFGHMVYLSDPAAIKTVFAGNPSVFHAGEANSMLAGLLGDSSLLLIDDDVHRDRRRLMSPPFHRDAVARQAGPIAEIAAANIAGWPMAKAFAVAPKMSEITLEVILRTVIGASDPVRLAALRKVMPRLLNVGPWATLALANPSLLNNRLWSRLRRRIEEADALLYAEIADRRADPDLAARTDTLAMLVRAADEDGRTMTERELRDQLITLLVAGHDTTATGLSWALERLTRHPVTLAKAVQAADASAAGDPAGDEYLDAVAKETLRIRPVVYDVGRVLTEAVEVAGYRLPAGVMVVPAIGLVHASAQLYPDPERFDPDRMVGATLSPTTWLPFGGGNRRCLGATFAMVEMRVVLREILRRVELSTTTTSGERPKLKHVIMVPHRGARIRVRATRDVSATSQATAQGAGCPAARGGGPSRAVGSQ

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_3(2VE4)
CP120_SYNY3
[Raw transfer]



CL6_A_3(2XFH)
ERYK_SACEN
[Raw transfer]
2 PsiBlast_PDB 94.3326% -92 - C3 -2VE4 12.2 CP120_SYNY3
1 PsiBlast_PDB 93.9126% -88 - C3 -2VE3 - CP120_SYNY3 -
70 HHSearch 93.3924% -95 * C3 *2VE3 - CP120_SYNY3 -
77 HHSearch 91.4320% -93 - C3 -3E6I - CP2E1_HUMAN -
13 PsiBlast_PDB 91.0524%-111 - C3 -5A1P - CP3A4_HUMAN -
14 PsiBlast_PDB 90.4824%-109 - C3 -5A1R - CP3A4_HUMAN -
4 PsiBlast_PDB 90.2724%-109 - C3 -3TJS - CP3A4_HUMAN -
9 PsiBlast_PDB 90.1824%-106 - C3 -4K9U - CP3A4_HUMAN -
17 PsiBlast_PDB 90.1524%-104 - C3 -1TQN - CP3A4_HUMAN -
5 PsiBlast_PDB 89.6924%-103 - C3 -4I3Q - CP3A4_HUMAN -
20 PsiBlast_PDB 89.3325%-109 - C3 -1W0F - CP3A4_HUMAN -
12 PsiBlast_PDB 89.2624%-105 - C3 -4K9X - CP3A4_HUMAN -
85 HHSearch 89.2420% -86 - C3 -2HI4 - CP1A2_HUMAN -
6 PsiBlast_PDB 89.0424%-102 - C3 -4I4G - CP3A4_HUMAN -
16 PsiBlast_PDB 88.7124%-104 - C3 -4D7D - CP3A4_HUMAN -
11 PsiBlast_PDB 88.6624%-107 - C3 -4K9W - CP3A4_HUMAN -
15 PsiBlast_PDB 88.6424%-105 - C3 -4D78 - CP3A4_HUMAN -
93 Fugue 88.5419% -81 - C3 -3DAX - CP7A1_HUMAN -
3 PsiBlast_PDB 88.4124%-110 - C3 -3UA1 - CP3A4_HUMAN -
8 PsiBlast_PDB 88.1424%-110 - C3 -4K9T - CP3A4_HUMAN -
23 PsiBlast_CBE 61.6335% -73 - C3 -2XFH 4.4 ERYK_SACEN