@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0640: (2016-04-24 )
MAPKKKVAGLIKLQIVAGQANPAPPVGPALGQHGVNIMEFCKAYNAATENQRGNVIPVEITVYEDRSFTFTLKTPPAAKLLLKAAGVAKGSAEPHKTKVAKVTWDQVREIAETKKTDLNANDVDAAAKIIAGTARSMGITVE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_9(3CJQ)
RL11_THETH
[Raw transfer]




SAH_D_11(3CJQ)
RL11_THETH
[Raw transfer]




2MM_H_14(3CJQ)
RL11_THETH
[Raw transfer]




EDO_B_4(3CJS)
RL11_THETH
[Raw transfer]




EDO_B_4(3CJS)
RL11_THETH
[Raw transfer]




4MM_B_9(3EGV)
RL11_THET8
[Raw transfer]




4MM_B_9(3EGV)
RL11_THET8
[Raw transfer]




21 PsiBlast_CBE 95.5767%-135 - C4 -2JQ7 - RL11_THEMA -
47 Fugue 91.5166%-114 - C4 -1MMS - RL11_THEMA -
35 HHSearch 91.5166%-114 - C4 -1MMS - RL11_THEMA -
23 PsiBlast_CBE 91.5067%-116 - C4 -1MMS - RL11_THEMA -
22 PsiBlast_CBE 91.5067%-116 - C4 -1OLN - RL11_THEMA -
7 PsiBlast_PDB 88.5365%-132 - C4 -2ZJQ - RL11_DEIRA -
25 PsiBlast_CBE 87.5262%-129 - C4 -3CJT - RL11_THETH -
26 PsiBlast_CBE 86.1462%-125 - C4 -3CJT - RL11_THETH -
27 PsiBlast_CBE 84.6962%-128 - C4 -3CJT - RL11_THETH -
6 PsiBlast_PDB 84.1365%-106 - C4 -2ZJP - RL11_DEIRA -
17 PsiBlast_PDB 83.1964%-111 - C4 -5DM7 - RL11_DEIRA -
9 PsiBlast_PDB 81.8265%-109 - C4 -3CF5 - RL11_DEIRA -
16 PsiBlast_PDB 81.7164%-106 - C4 -5DM6 - RL11_DEIRA -
28 PsiBlast_CBE 81.2261%-131 - C4 -3CJQ Error RL11_THETH
30 PsiBlast_CBE 80.3861%-131 - C4 -3CJQ Error RL11_THETH
29 PsiBlast_CBE 76.2961%-128 - C4 -3CJQ Error RL11_THETH
42 HHSearch 70.6168%-155 - C4 -3CJS 2.1 RL11_THETH
32 PsiBlast_CBE 70.4269%-156 - C4 -3CJS 3.0 RL11_THETH
34 HHSearch 67.6862%-135 - C4 -3EGV 2.8 RL11_THET8
31 PsiBlast_CBE 67.6862%-135 - C4 -3EGV 2.8 RL11_THET8