@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0672: (2016-04-24 )
MSDTHVVTNQVPPLENYNPASSPVLIEALIQEGGQWGLDEVNEVGAISASCQAQRWGELADRNRPILHTHDAYGYRVDEVEYDPAYHELMRTAITHGMHAAPWADDRPGAHVVRAAKTSVWTVEPGHICPISMTYAVVPALRYNSELAAVYEPLLTSREYDPELKPATTKAGITAGMSMTEKQGGSDVRAGTTQATPNADGSYSLTGHKWFTSAPMCDIFLVLAQAPDGLSCFLLPRVLPDGTRNRMFLQRLKDKLGNHANASSEVEYDGAVAWLVGEEGRGVPTIIEMVNLTRLDCALGSATSMRTGLTRAVHHAQHRKAFGAYLIDQPLMRNVLADLAVEAEAATIVAMRMAGATDNAVRGNETEALLRRIGLAAAKYWVCKRSTAHAAEALECLGGNGYVEDSGMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPACVEVLFDELARSAGQDPRLDGHVERLRPQLGDLDTIGYRARKIAEDICLALQGSLLVRHGHPAVAEAFLATRLGGQWGGAYGTMPAGLDLAPILERALVKG

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_3(3DJL)
AIDB_ECOLI
[Raw transfer]




FAD_A_3(3DJL)
AIDB_ECOLI
[Raw transfer]




FAD_A_3(3DJL)
AIDB_ECOLI
[Raw transfer]




FAD_A_3(4Y9L)
ACD11_CAEEL
[Raw transfer]




FAD_A_3(4Y9J)
ACD11_CAEEL
[Raw transfer]




FAD_A_3(4Y9J)
ACD11_CAEEL
[Raw transfer]




48 HHSearch 96.9946% -82 - C3 -5EZ3 - ? -
29 PsiBlast_CBE 96.3644% -74 - C3 -3U33 - AIDB_ECOLI -
1 PsiBlast_PDB 96.3246% -83 - C3 -5EZ3 - ? -
22 PsiBlast_CBE 96.3046% -82 - C3 -5EZ3 - ? -
25 PsiBlast_CBE 96.1444% -75 - C3 -3U33 - AIDB_ECOLI -
33 PsiBlast_CBE 96.1244% -75 - C3 -3U33 - AIDB_ECOLI -
30 PsiBlast_CBE 95.9444% -74 - C3 -3U33 - AIDB_ECOLI -
23 PsiBlast_CBE 95.9246% -82 - C3 -5EZ3 - ? -
3 PsiBlast_PDB 95.8744% -74 - C3 -3U33 - AIDB_ECOLI -
31 PsiBlast_CBE 95.8544% -75 - C3 -3U33 - AIDB_ECOLI -
2 PsiBlast_PDB 95.8544% -73 - C3 -3DJL 11.1 AIDB_ECOLI
34 PsiBlast_CBE 95.7244% -74 - C3 -3U33 - AIDB_ECOLI -
24 PsiBlast_CBE 95.6244% -74 - C3 -3U33 - AIDB_ECOLI -
28 PsiBlast_CBE 95.5044% -74 - C3 -3U33 - AIDB_ECOLI -
32 PsiBlast_CBE 95.4344% -74 - C3 -3U33 - AIDB_ECOLI -
38 Fugue 95.1642% -69 - C3 -3DJL 11.1 AIDB_ECOLI
21 PsiBlast_CBE 95.1046% -82 - C3 -5EZ3 - ? -
49 HHSearch 92.2543% -69 - C3 -3DJL 11.1 AIDB_ECOLI
50 HHSearch 82.9930% -74 - C3 -4Y9J 9.2 ACD11_CAEEL
39 Fugue 79.6728% -64 - C3 -4Y9J - ACD11_CAEEL -
5 PsiBlast_PDB 76.1230% -71 - C3 -4Y9L 9.4 ACD11_CAEEL
4 PsiBlast_PDB 75.5730% -72 - C3 -4Y9J 9.2 ACD11_CAEEL