@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0687: (2016-04-24 )
MSARGGSLHGRVAFVTGAARAQGRSHAVRLAREGADIVALDICAPVSGSVTYPPATSEDLGETVRAVEAEGRKVLAREVDIRDDAELRRLVADGVEQFGRLDIVVANAGVLGWGRLWELTDEQWETVIGVNLTGTWRTLRATVPAMIDAGNGGSIVVVSSSAGLKATPGNGHYAASKHALVALTNTLAIELGEFGIRVNSIHPYSVDTPMIEPEAMIQTFAKHPGYVHSFPPMPLQPKGFMTPDEISDVVVWLAGDGSGALSGNQIPVDKGALKY

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_D_8(3PGX)
Y4146_MYCPA
[Raw transfer]




NAD_C_7(3PGX)
Y4146_MYCPA
[Raw transfer]




NAD_B_6(3PGX)
Y4146_MYCPA
[Raw transfer]




NAD_B_8(5EJ2)
?
[Raw transfer]




NAD_A_5(3PGX)
Y4146_MYCPA
[Raw transfer]




NAD_D_15(3UVE)
?
[Raw transfer]




NAD_B_8(3UVE)
?
[Raw transfer]




NAD_A_5(3UVE)
?
[Raw transfer]




NAD_A_5(5EJ2)
?
[Raw transfer]




NAD_D_13(5EJ2)
?
[Raw transfer]




NAD_C_10(5EJ2)
?
[Raw transfer]




NAD_A_3(4RGB)
?
[Raw transfer]




NAD_A_3(4RGB)
?
[Raw transfer]




NAD_A_5(3TSC)
?
[Raw transfer]




NAD_B_6(3TSC)
?
[Raw transfer]




NAD_D_10(3TSC)
?
[Raw transfer]




NAD_A_5(3TSC)
?
[Raw transfer]




NAD_C_12(3UVE)
?
[Raw transfer]




NAD_B_4(4RGB)
?
[Raw transfer]




NAD_D_8(3T7C)
?
[Raw transfer]




NAD_A_5(3T7C)
?
[Raw transfer]




NAD_B_6(3T7C)
?
[Raw transfer]




NAD_C_7(3TSC)
?
[Raw transfer]




NAD_C_7(3T7C)
?
[Raw transfer]




22 PsiBlast_CBE 96.9680% -90 - C1 -3PGX 12.6 Y4146_MYCPA
21 PsiBlast_CBE 94.1380% -89 - C1 -3PGX 12.7 Y4146_MYCPA
23 PsiBlast_CBE 93.7580% -88 - C1 -3PGX 12.7 Y4146_MYCPA
1 PsiBlast_PDB 93.3280% -87 - C1 -3PGX 12.7 Y4146_MYCPA
6 PsiBlast_PDB 81.5045% -89 - C1 -3T7C 10.7 ?
5 PsiBlast_PDB 81.0945% -90 - C1 -5EJ2 12.0 ?
32 PsiBlast_CBE 80.7545% -87 - C1 -5EJ2 11.4 ?
34 PsiBlast_CBE 80.1245% -89 - C1 -5EJ2 12.1 ?
29 PsiBlast_CBE 80.1145% -96 - C1 -3UVE 12.1 ?
37 PsiBlast_CBE 79.9445% -90 - C1 -3T7C 10.7 ?
33 PsiBlast_CBE 79.8645% -86 - C1 -5EJ2 11.9 ?
31 PsiBlast_CBE 79.7445% -95 - C1 -3UVE 12.0 ?
35 PsiBlast_CBE 79.6345% -88 - C1 -3T7C 11.0 ?
24 PsiBlast_CBE 79.2548% -83 - C1 -3TSC 12.3 ?
25 PsiBlast_CBE 78.9648% -85 - C1 -3TSC 12.6 ?
30 PsiBlast_CBE 78.7145% -95 - C1 -3UVE 11.8 ?
4 PsiBlast_PDB 78.2445% -96 - C1 -3UVE 11.9 ?
36 PsiBlast_CBE 77.9745% -92 - C1 -3T7C 11.1 ?
26 PsiBlast_CBE 77.9548% -84 - C1 -3TSC 12.3 ?
28 PsiBlast_CBE 77.7944% -85 - C1 -3OEC - ? -
2 PsiBlast_PDB 77.0648% -83 - C1 -3TSC 12.6 ?
106 HHSearch 72.6246% -81 - C1 -3TSC 12.6 ?
8 PsiBlast_PDB 71.5438% -91 - C1 -4RGB 12.0 ?
49 PsiBlast_CBE 71.4538% -90 - C1 -4RGB 12.2 ?
105 HHSearch 62.4636% -84 - C1 -4RGB 12.1 ?