@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0688: (2016-04-24 )
MNAHVTSREGVNEFDDGIVIVGGGLAAARTAEQLRRAGYSGRLTIVSDEVHLPYDRPPLSKEVLRSEVDDVALKPREFYDEKDIALRLGSAAVSLDTGEQTVTLADGTVLGYDELVIATGLVPRRIPSLPDLDGIRVLRSFDESMALRKHASAARHAVVVGAGFIGCEVAASLRGLGVDVVLVEPQPAPLASVLGEQIGQLVTRLHRDEGVDVRTGVTVAEVRGKGHVDAVVLTDGTELPADLVVVGIGSTPATEWLEGSGVEVDNGVICDKAGRTSAPNVWALGDVASWRDPMGHQARVEHWSNVADQARVVVPAMLGTDVPTGVVVPYFWSDQYDVKIQCLGEPHATDVVHLVEDDGRKFLAYYERDGVLVGVVGGGMAGKVMKVRGKIAAGAPIAEVLDQTQA

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_2(2GR1)
?
[Raw transfer]




FAD_A_2(2YVF)
?
[Raw transfer]




FAD_A_7(4H4Q)
?
[Raw transfer]




FAD_A_2(2YVG)
?
[Raw transfer]




FAD_A_2(4H4W)
?
[Raw transfer]




FAD_A_3(4H4U)
?
[Raw transfer]




FAD_A_2(4H50)
?
[Raw transfer]




FAD_A_2(2GQW)
?
[Raw transfer]




FAD_A_2(4H4P)
?
[Raw transfer]




FAD_A_2(4H4X)
?
[Raw transfer]




FAD_P_2(3FG2)
?
[Raw transfer]




FAD_A_2(4H4Y)
?
[Raw transfer]




FAD_P_6(2YVJ)
?
[Raw transfer]




FAD_A_2(4H4R)
?
[Raw transfer]




FAD_A_2(2GR3)
?
[Raw transfer]




FAD_A_2(2GR2)
?
[Raw transfer]




FAD_A_2(2GQW)
?
[Raw transfer]




FAD_A_2(4H4T)
?
[Raw transfer]




FAD_A_2(2GR0)
?
[Raw transfer]




FAD_C_3(1D7Y)
?
[Raw transfer]




FAD_A_2(4H4Z)
?
[Raw transfer]




FAD_C_3(1D7Y)
?
[Raw transfer]




FAD_A_4(4H4S)
?
[Raw transfer]




FAD_A_2(4H4V)
?
[Raw transfer]




FAD_P_2(3FG2)
?
[Raw transfer]




FAD_B_2(1F3P)
?
[Raw transfer]




FAD_A_5(2YVJ)
?
[Raw transfer]




APR_A_3(2GR2)
?
[Raw transfer]




ADP_A_3(2GR0)
?
[Raw transfer]




GOL_A_7(3EF6)
TODA_PSEP1
[Raw transfer]




GOL_A_9(3EF6)
TODA_PSEP1
[Raw transfer]




GOL_A_9(3EF6)
TODA_PSEP1
[Raw transfer]




1 PsiBlast_PDB 95.8236%-115 * C1 *3LXD - ? -
2 PsiBlast_PDB 94.0737%-116 - C1 -3FG2 10.9 ?
81 HHSearch 93.5735%-108 - C1 -3FG2 10.8 ?
80 HHSearch 92.6236%-106 - C1 -3LXD - ? -
79 HHSearch 89.8232%-109 - C1 -1Q1R - CAMA_PSEPU -
7 PsiBlast_PDB 88.4835%-110 - C1 -2GR1 13.1 ?
12 PsiBlast_PDB 88.2635%-109 - C1 -4H4U 11.3 ?
10 PsiBlast_PDB 87.5135%-108 - C1 -2YVG 12.8 ?
20 PsiBlast_PDB 87.3534%-109 - C1 -4H50 13.0 ?
6 PsiBlast_PDB 87.2735%-109 - C1 -2GR0 13.0 ?
25 PsiBlast_CBE 87.1934%-109 - C1 -4H4Z 11.9 ?
9 PsiBlast_PDB 87.0935%-108 - C1 -2YVF 11.7 ?
16 PsiBlast_PDB 87.0635%-109 - C1 -2GR3 12.9 ?
5 PsiBlast_PDB 87.0035%-108 - C1 -2GQW 13.1 ?
26 PsiBlast_CBE 86.9034%-108 - C1 -4H4Y 13.3 ?
13 PsiBlast_PDB 86.8435%-108 - C1 -4H4T 13.1 ?
8 PsiBlast_PDB 86.7835%-109 - C1 -2GR2 13.1 ?
11 PsiBlast_PDB 86.7335%-110 - C1 -2YVJ 11.4 ?
29 PsiBlast_CBE 86.6834%-109 - C1 -4H4R 13.2 ?
4 PsiBlast_PDB 86.5235%-107 - C1 -1F3P 12.3 ?
27 PsiBlast_CBE 86.5034%-109 - C1 -4H4X 13.2 ?
3 PsiBlast_PDB 86.2435%-107 - C1 -1D7Y 11.2 ?
14 PsiBlast_PDB 86.1734%-107 - C1 -4H4Q 11.4 ?
15 PsiBlast_PDB 86.1434%-109 - C1 -4H4P 13.3 ?
31 PsiBlast_CBE 86.0534%-108 - C1 -4H4V 13.2 ?
30 PsiBlast_CBE 85.7134%-107 - C1 -4H4W 13.3 ?
28 PsiBlast_CBE 85.6034%-109 - C1 -4H4S 13.7 ?
99 Fugue 85.5234%-101 - C1 -1D7Y 11.2 ?
77 HHSearch 84.8434%-101 - C1 -2GQW 13.1 ?
21 PsiBlast_CBE 84.6735%-109 - C1 -2YVJ 11.6 ?
76 HHSearch 84.2932%-103 - C1 -3EF6 3.0 TODA_PSEP1
34 PsiBlast_CBE 81.1236%-114 - C1 -3EF6 3.2 TODA_PSEP1