@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0752c: (2016-04-25 )
MFVLNDDERVIVETAAAFAGKRLAPHALEWDAAKHFPVDVLREAAELGMAAIYCRDDVGGSGLRRLDGVRIFEQLAIADPVTAAFLSIHNMCAWMIDSFGTDEQRKDWIPRLATMGVIASYCLTEPGAGSDAGALSTRAVRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAEGPRGVSAFIVEKGTPGLSFGAPEAKMGWHAQPTAQVVLDGVRVPAEAMLGGADGEGAGFGIAMSGLNGGRLNIAACSLGGAQAAFDKAGAYVRDRQAFGGSLLDEPTVRFTLADMATGLQTSRMLLWRAASALDDDDADKVELCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGLEKIVRDLRVHRILEGTNEIMRLVIGRAEAARFRATV

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_4(2D29)
?
[Raw transfer]



FAD_A_3(2D29)
?
[Raw transfer]



FAD_A_3(3NF4)
?
[Raw transfer]



FAD_A_3(3NF4)
?
[Raw transfer]



FAD_C_3(2DVL)
?
[Raw transfer]



FAD_K_11(1JQI)
ACADS_RAT
[Raw transfer]



FAD_A_4(2UXW)
ACADV_HUMAN
[Raw transfer]



FAD_A_4(2UXW)
ACADV_HUMAN
[Raw transfer]



FAD_A_4(2UXW)
ACADV_HUMAN
[Raw transfer]



FAD_B_7(2PG0)
?
[Raw transfer]



FAD_A_3(3B96)
ACADV_HUMAN
[Raw transfer]



FAD_A_5(2PG0)
?
[Raw transfer]



COS_A_4(4L1F)
?
[Raw transfer]



FAD_A_5(2PG0)
?
[Raw transfer]



COS_A_4(4L1F)
?
[Raw transfer]



COS_B_9(4L1F)
?
[Raw transfer]



FAD_A_4(1UKW)
?
[Raw transfer]



FAD_A_3(2Z1Q)
?
[Raw transfer]



FAD_D_4(2DVL)
?
[Raw transfer]



FAD_B_4(2Z1Q)
?
[Raw transfer]



FAD_B_4(2Z1Q)
?
[Raw transfer]
22 PsiBlast_CBE 97.4252%-103 - C2 -1RX0 - ACAD8_HUMAN -
103 HHSearch 96.7353%-102 - C2 -1RX0 - ACAD8_HUMAN -
21 PsiBlast_CBE 96.6852%-103 - C2 -1RX0 - ACAD8_HUMAN -
23 PsiBlast_CBE 95.2352%-103 - C2 -1RX0 - ACAD8_HUMAN -
1 PsiBlast_PDB 94.7552%-103 - C2 -1RX0 - ACAD8_HUMAN -
124 Fugue 86.0938% -92 - C2 -1BUC - ACDS_MEGEL -
32 PsiBlast_CBE 85.8537% -92 - C2 -1BUC - ACDS_MEGEL -
24 PsiBlast_CBE 85.5239% -94 - C2 -4L1F 7.5 ?
8 PsiBlast_PDB 85.4337% -92 - C2 -1BUC - ACDS_MEGEL -
2 PsiBlast_PDB 84.6339% -95 - C2 -4L1F 6.8 ?
123 HHSearch 84.4339% -96 - C2 -4L1F 6.9 ?
14 PsiBlast_PDB 84.2832% -94 - C2 -1EGE - ACADM_HUMAN -
64 PsiBlast_CBE 84.0032% -91 - C2 -1EGD - ACADM_HUMAN -
5 PsiBlast_PDB 83.8737% -95 - C2 -4N5F - ? -
82 PsiBlast_CBE 83.4237% -96 - C2 -2D29 8.8 ?
6 PsiBlast_PDB 83.3740% -96 - C2 -2DVL 5.2 ?
47 PsiBlast_CBE 83.2932% -90 - C2 -2A1T - ACADM_HUMAN -
10 PsiBlast_PDB 83.2333% -91 - C2 -1UDY - ACADM_PIG -
62 PsiBlast_CBE 82.9932% -94 - C2 -1EGD - ACADM_HUMAN -
43 PsiBlast_CBE 82.8533% -91 - C2 -3MDE - ACADM_PIG -
3 PsiBlast_PDB 82.5438% -93 - C2 -1UKW 7.4 ?
83 PsiBlast_CBE 82.1637% -94 - C2 -2D29 9.0 ?
30 PsiBlast_CBE 81.4640% -95 - C2 -2DVL 5.1 ?
71 PsiBlast_CBE 81.3235%-101 - C2 -2Z1Q 7.8 ?
70 PsiBlast_CBE 80.2335%-100 - C2 -2Z1Q 7.2 ?
31 PsiBlast_CBE 79.9236% -94 - C2 -1JQI 7.0 ACADS_RAT
126 Fugue 79.1534% -90 - C2 -2Z1Q 7.2 ?
116 HHSearch 79.0333% -98 - C2 -2PG0 5.1 ?
80 PsiBlast_CBE 78.4334%-103 - C2 -2PG0 4.2 ?
106 HHSearch 77.8137% -98 - C2 -3NF4 7.1 ?
113 HHSearch 77.3033% -96 - C2 -2UXW 7.0 ACADV_HUMAN
69 PsiBlast_CBE 77.1037% -96 - C2 -3NF4 7.1 ?
81 PsiBlast_CBE 76.0434%-101 - C2 -2PG0 5.0 ?
125 Fugue 73.0831% -92 - C2 -2UXW 6.9 ACADV_HUMAN
79 PsiBlast_CBE 71.6933% -95 - C2 -3B96 7.0 ACADV_HUMAN
78 PsiBlast_CBE 70.5033% -97 - C2 -2UXW 7.0 ACADV_HUMAN