@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0764c: (2016-04-25 )
MSAVALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDECGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPACVRYRRRTGV

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_2(1E9X)
CP51_MYCTU
[Raw transfer]




HEM_A_2(1E9X)
CP51_MYCTU
[Raw transfer]




HEM_A_2(1U13)
CP51_MYCTU
[Raw transfer]




HEM_A_2(1EA1)
CP51_MYCTU
[Raw transfer]




5PS_B_6(4BY0)
CP51_TRYCC
[Raw transfer]




HEM_A_2(2W0B)
CP51_MYCTU
[Raw transfer]




TPF_A_2(2WV2)
?
[Raw transfer]




5PS_A_4(4BY0)
CP51_TRYCC
[Raw transfer]




GOL_A_16(4C0C)
CP51_TRYCC
[Raw transfer]




HEM_A_3(3JUS)
CP51A_HUMAN
[Raw transfer]




HEM_A_3(3LD6)
CP51A_HUMAN
[Raw transfer]




HEM_B_8(3JUS)
CP51A_HUMAN
[Raw transfer]




HEM_A_2(3KSW)
CP51_TRYCC
[Raw transfer]




ECN_A_4(3JUS)
CP51A_HUMAN
[Raw transfer]




HEM_A_3(4CK8)
CP51_TRYCC
[Raw transfer]




ECN_B_9(3JUS)
CP51A_HUMAN
[Raw transfer]




HEM_A_2(3ZG2)
CP51_TRYCC
[Raw transfer]




HEM_A_2(4CKA)
CP51_TRYCC
[Raw transfer]




HEM_A_2(3ZG3)
CP51_TRYCC
[Raw transfer]




HEM_B_7(3LD6)
CP51A_HUMAN
[Raw transfer]




NEE_A_3(4H6O)
CP51_TRYCC
[Raw transfer]




HEM_A_2(4CK9)
CP51_TRYCC
[Raw transfer]




TPF_A_4(2WUZ)
CP51_TRYCC
[Raw transfer]




TPF_A_4(2WX2)
CP51_TRYCC
[Raw transfer]




TPF_B_6(2WUZ)
CP51_TRYCC
[Raw transfer]




HEM_A_2(4UQH)
CP51_TRYCC
[Raw transfer]




HEM_A_2(3JUV)
CP51A_HUMAN
[Raw transfer]




TPF_A_3(3KHM)
CP51_TRYCC
[Raw transfer]




TPF_B_6(2WX2)
CP51_TRYCC
[Raw transfer]




EDO_A_5(4C28)
CP51_TRYCC
[Raw transfer]




EDO_A_5(4C27)
CP51_TRYCC
[Raw transfer]




OXY_A_4(4LXJ)
CP51_YEAST
[Raw transfer]




2 PsiBlast_PDB 98.19100%-110 - C5 -1E9X 12.9 CP51_MYCTU
8 PsiBlast_PDB 97.5699%-112 - C5 -2W0B 12.8 CP51_MYCTU
1 PsiBlast_PDB 97.48100%-109 - C5 -1EA1 12.5 CP51_MYCTU
7 PsiBlast_PDB 96.5899% -91 - C- -2VKU - CP51_MYCTU -
9 PsiBlast_PDB 96.4899%-110 - C5 -1U13 12.6 CP51_MYCTU
3 PsiBlast_PDB 95.08100% -94 - C- -1H5Z - CP51_MYCTU -
4 PsiBlast_PDB 94.4699% -92 - C- -2BZ9 - CP51_MYCTU -
21 PsiBlast_CBE 94.3199% -90 - C- -2BZ9 - CP51_MYCTU -
5 PsiBlast_PDB 92.8799% -91 - C- -2CI0 - CP51_MYCTU -
93 HHSearch 92.86100% -92 - C- -2CIB - CP51_MYCTU -
117 Fugue 92.7993%-107 - C5 -1E9X 12.4 CP51_MYCTU
6 PsiBlast_PDB 92.6599% -92 - C- -2CIB - CP51_MYCTU -
11 PsiBlast_PDB 75.0233%-104 - C5 -3JUS 12.1 CP51A_HUMAN
23 PsiBlast_CBE 74.4433%-106 - C5 -3JUS 12.0 CP51A_HUMAN
12 PsiBlast_PDB 74.3833%-104 - C5 -3JUV 11.2 CP51A_HUMAN
94 HHSearch 74.3530%-100 - C5 -4UYM - ? -
10 PsiBlast_PDB 74.1833%-104 - C5 -3LD6 12.4 CP51A_HUMAN
96 HHSearch 74.0732% -99 * C5 *3LD6 - CP51A_HUMAN -
25 PsiBlast_CBE 73.4532%-100 - C5 -3L4D - ? -
95 HHSearch 73.4029% -93 - C5 -4LXJ 2.7 CP51_YEAST
16 PsiBlast_PDB 72.4432%-110 - C5 -4UQH 12.0 CP51_TRYCC
15 PsiBlast_PDB 72.4332%-107 - C5 -4C0C 2.4 CP51_TRYCC
22 PsiBlast_CBE 72.1933%-106 - C5 -3LD6 12.2 CP51A_HUMAN
45 PsiBlast_CBE 72.1732%-107 - C5 -2WUZ 4.8 CP51_TRYCC
39 PsiBlast_CBE 71.5132%-104 - C5 -3ZG2 12.3 CP51_TRYCC
38 PsiBlast_CBE 71.2932%-105 - C5 -3ZG3 12.4 CP51_TRYCC
44 PsiBlast_CBE 71.2632%-109 - C5 -2WUZ 4.8 CP51_TRYCC
14 PsiBlast_PDB 71.0632%-103 - C5 -4BY0 5.4 CP51_TRYCC
31 PsiBlast_CBE 70.8832%-111 - C5 -4C28 3.3 CP51_TRYCC
26 PsiBlast_CBE 70.8832%-106 - C5 -4BY0 7.1 CP51_TRYCC
20 PsiBlast_PDB 70.7532%-110 - C5 -4C27 3.2 CP51_TRYCC
34 PsiBlast_CBE 70.6332%-108 - C5 -4CKA 11.9 CP51_TRYCC
37 PsiBlast_CBE 70.5532%-102 - C5 -4CK8 12.0 CP51_TRYCC
46 PsiBlast_CBE 70.5232%-106 - C5 -4H6O 6.2 CP51_TRYCC
43 PsiBlast_CBE 70.2332%-104 - C5 -2WX2 5.3 CP51_TRYCC
19 PsiBlast_PDB 69.8532%-109 - C5 -3KHM 4.5 CP51_TRYCC
54 PsiBlast_CBE 69.7631%-107 - C5 -2WV2 4.7 ?
35 PsiBlast_CBE 69.6532%-108 - C5 -4CK9 11.8 CP51_TRYCC
40 PsiBlast_CBE 69.2132%-101 - C5 -3KSW 8.5 CP51_TRYCC
42 PsiBlast_CBE 68.2632%-104 - C5 -2WX2 5.1 CP51_TRYCC