@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0769: (2016-04-25 )
MFDSKVAIVTGAAQGIGQAYAQALAREGASVVVADINADGAAAVAKQIVADGGTAIHVPVDVSDEDSAKAMVDRAVGAFGGIDYLVNNAAIYGGMKLDLLLTVPLDYYKKFMSVNHDGVLVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNFYGLAKVGVNGLTQQLARELGGMKIRINAIAPGPIDTEATRTVTPAELVKNMVQTIPLSRMGTPEDLVGMCLFLLSDSASWITGQIFNVDGGQIIRS

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_D_9(4NBU)
?
[Raw transfer]




NAI_A_5(4NBU)
?
[Raw transfer]




NAD_D_15(3RWB)
PLDH_RHILO
[Raw transfer]




NAD_A_5(3NUG)
PLDH_RHILO
[Raw transfer]




NAD_A_5(3RWB)
PLDH_RHILO
[Raw transfer]




NAD_C_12(3RWB)
PLDH_RHILO
[Raw transfer]




NAI_B_6(4NBU)
?
[Raw transfer]




NAI_C_8(4NBU)
?
[Raw transfer]




NAD_C_7(3NUG)
PLDH_RHILO
[Raw transfer]




NAD_B_10(3RWB)
PLDH_RHILO
[Raw transfer]




NAD_B_6(3NUG)
PLDH_RHILO
[Raw transfer]




NAD_D_9(3NUG)
PLDH_RHILO
[Raw transfer]




NAD_A_9(1FMC)
HDHA_ECOLI
[Raw transfer]




NAD_C_15(4WEC)
?
[Raw transfer]




NAD_B_10(4WEC)
?
[Raw transfer]




NAD_D_18(4WEC)
?
[Raw transfer]




NAD_A_5(4WEC)
?
[Raw transfer]




118 HHSearch 85.7581%-130 - C1 -3QIV - ? -
1 PsiBlast_PDB 85.4480%-130 - C1 -3QIV - ? -
43 PsiBlast_CBE 79.2635%-108 - C1 -3R1I - ? -
125 HHSearch 77.9442%-108 - C1 -3GAF - ? -
37 PsiBlast_CBE 77.6535%-103 - C1 -4JRO - ? -
49 PsiBlast_CBE 77.3136%-107 - C1 -2EWM - PED_AROAE -
19 PsiBlast_PDB 77.0735%-102 - C1 -4JRO - ? -
40 PsiBlast_CBE 76.6938%-110 - C1 -2D1Y - ? -
3 PsiBlast_PDB 76.6641%-109 - C1 -3GAF - ? -
30 PsiBlast_CBE 75.7839%-108 - C1 -4NBW - ? -
133 HHSearch 75.5233%-107 - C1 -3AWD - ? -
80 PsiBlast_CBE 75.3335%-107 - C1 -1VL8 - ? -
131 HHSearch 75.2338%-108 - C1 -1FMC - HDHA_ECOLI -
81 PsiBlast_CBE 75.0935%-106 - C1 -1VL8 - ? -
21 PsiBlast_CBE 75.0838%-110 - C1 -4NBU 10.6 ?
41 PsiBlast_CBE 75.0238%-111 - C1 -2D1Y - ? -
29 PsiBlast_CBE 74.9439%-103 - C1 -4NBW - ? -
119 HHSearch 74.8534% -96 - C1 -2CFC - HCDR_XANP2 -
23 PsiBlast_CBE 74.8438%-109 - C1 -4NBU 10.4 ?
12 PsiBlast_PDB 74.8239%-106 - C1 -4NBW - ? -
2 PsiBlast_PDB 74.6938%-110 - C1 -4NBU 10.2 ?
22 PsiBlast_CBE 74.6738%-111 - C1 -4NBU 10.4 ?
69 PsiBlast_CBE 74.4540%-101 - C1 -3NUG 11.4 PLDH_RHILO
6 PsiBlast_PDB 73.8837%-108 - C1 -1FMC 9.5 HDHA_ECOLI
71 PsiBlast_CBE 73.8540%-103 - C1 -3NUG 10.9 PLDH_RHILO
66 PsiBlast_CBE 73.1940%-101 - C1 -3RWB 11.2 PLDH_RHILO
65 PsiBlast_CBE 72.7640% -98 - C1 -3RWB 11.5 PLDH_RHILO
70 PsiBlast_CBE 72.6540%-103 - C1 -3NUG 10.8 PLDH_RHILO
64 PsiBlast_CBE 72.6540%-100 - C1 -3RWB 10.9 PLDH_RHILO
68 PsiBlast_CBE 72.3840%-103 - C1 -3NUG 11.0 PLDH_RHILO
67 PsiBlast_CBE 72.2240%-103 - C1 -3RWB 11.1 PLDH_RHILO
34 PsiBlast_CBE 67.3935% -99 - C1 -4WEC 9.4 ?
18 PsiBlast_PDB 66.4835% -98 - C1 -4WEC 7.3 ?
35 PsiBlast_CBE 65.7535% -97 - C1 -4WEC 8.3 ?
33 PsiBlast_CBE 64.1835%-100 - C1 -4WEC 8.8 ?