@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0858c: (2016-04-26 )
MTVSRLRPYATTVFAEMSALATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERPAT

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

QLP_B_4(2R5E)
?
[Raw transfer]




C6P_B_3(2R5C)
?
[Raw transfer]




QLP_A_3(2R5E)
?
[Raw transfer]




GOL_B_7(2O0R)
DAPC_MYCTU
[Raw transfer]




GOL_A_6(2O0R)
DAPC_MYCTU
[Raw transfer]




GOL_A_3(3E2F)
KAT3_MOUSE
[Raw transfer]




GOL_B_9(3E2F)
KAT3_MOUSE
[Raw transfer]




GOL_B_9(2ZJG)
KAT3_MOUSE
[Raw transfer]




HCI_F_6(1V2F)
?
[Raw transfer]




KMT_E_5(1V2E)
?
[Raw transfer]




KMT_F_6(1V2E)
?
[Raw transfer]




KYN_A_3(3E2Z)
KAT3_MOUSE
[Raw transfer]




GOL_A_4(3E2F)
KAT3_MOUSE
[Raw transfer]




HCI_E_5(1V2F)
?
[Raw transfer]




PMP_A_4(3E2Y)
KAT3_MOUSE
[Raw transfer]




PMP_A_4(3E2Y)
KAT3_MOUSE
[Raw transfer]




KYN_B_5(3E2Z)
KAT3_MOUSE
[Raw transfer]




PMP_A_3(1W7N)
KAT1_HUMAN
[Raw transfer]




PMP_B_5(3E2Y)
KAT3_MOUSE
[Raw transfer]




GLU_C_3(1GDE)
?
[Raw transfer]




DPN_A_3(1W7M)
KAT1_HUMAN
[Raw transfer]




PMP_B_9(1YIY)
?
[Raw transfer]




GLN_B_6(3E2Y)
KAT3_MOUSE
[Raw transfer]




GOL_A_4(2ZJG)
KAT3_MOUSE
[Raw transfer]




PLP_E_5(1GDE)
?
[Raw transfer]




PLP_C_3(1U08)
YBDL_ECOLI
[Raw transfer]




PMP_B_4(3E2Z)
KAT3_MOUSE
[Raw transfer]




GLU_D_4(1GDE)
?
[Raw transfer]




PLP_C_3(1U08)
YBDL_ECOLI
[Raw transfer]




GLN_A_3(3E2Y)
KAT3_MOUSE
[Raw transfer]




PLP_F_6(1GCK)
AAT_THET8
[Raw transfer]




PLP_B_6(5BJ4)
AAT_THET8
[Raw transfer]




PLP_A_5(5BJ4)
AAT_THET8
[Raw transfer]




PLP_A_3(1GD9)
?
[Raw transfer]




PLP_B_4(1GD9)
?
[Raw transfer]




PLP_A_3(1GD9)
?
[Raw transfer]




PLP_A_3(1V2F)
?
[Raw transfer]




PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]




PLP_A_3(1V2E)
?
[Raw transfer]




PLP_F_6(1GDE)
?
[Raw transfer]




PLP_B_4(1DJU)
?
[Raw transfer]




PLP_B_6(1B5P)
AAT_THET8
[Raw transfer]




PLP_B_4(1V2F)
?
[Raw transfer]




PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]




PLP_E_5(1GCK)
AAT_THET8
[Raw transfer]




PLP_B_6(1B5O)
AAT_THET8
[Raw transfer]




PLP_A_5(1B5O)
AAT_THET8
[Raw transfer]




PLP_B_4(1V2E)
?
[Raw transfer]




PLP_A_3(1DJU)
?
[Raw transfer]




21 PsiBlast_CBE 99.1699%-125 - C1 -2O0R 3.0 DAPC_MYCTU
98 HHSearch 99.00100%-123 - C1 -2O0R 3.1 DAPC_MYCTU
1 PsiBlast_PDB 98.7799%-123 - C1 -2O0R - DAPC_MYCTU -
14 PsiBlast_PDB 70.7036%-119 - C1 -1GDE 3.4 ?
15 PsiBlast_PDB 69.7136%-119 - C1 -1GD9 3.7 ?
85 HHSearch 69.6738%-112 - C1 -3E2Y 5.8 KAT3_MOUSE
95 HHSearch 69.6635%-113 - C1 -4WLH - KAT1_HUMAN -
32 PsiBlast_CBE 69.5336%-119 - C1 -1GD9 2.6 ?
30 PsiBlast_CBE 69.1036%-119 - C1 -1DJU 2.7 ?
90 HHSearch 69.0537%-112 - C1 -1YIZ - ? -
31 PsiBlast_CBE 68.9936%-118 - C1 -1GDE 3.7 ?
2 PsiBlast_PDB 68.9238%-117 - C1 -1U08 5.9 YBDL_ECOLI
13 PsiBlast_PDB 68.6436%-121 - C1 -1DJU 3.3 ?
96 HHSearch 68.4735%-112 - C1 -4WP0 - KAT1_HUMAN -
25 PsiBlast_CBE 68.4536%-115 - C1 -3E2Z 3.3 KAT3_MOUSE
4 PsiBlast_PDB 68.2336%-115 - C1 -3E2Y 5.8 KAT3_MOUSE
20 PsiBlast_PDB 67.9433%-112 - C1 -4WP0 - KAT1_HUMAN -
28 PsiBlast_CBE 67.4534%-115 - C1 -2R5E 7.7 ?
82 HHSearch 67.1738%-113 - C1 -1U08 5.9 YBDL_ECOLI
37 PsiBlast_CBE 67.1733%-112 - C1 -4WLH - KAT1_HUMAN -
79 HHSearch 66.9235%-115 - C1 -1GD9 3.7 ?
26 PsiBlast_CBE 66.8536%-116 - C1 -3E2F 2.6 KAT3_MOUSE
8 PsiBlast_PDB 66.7241%-123 - C1 -1V2F 4.7 ?
83 HHSearch 66.6435%-115 * C1 *1B5P 3.1 AAT_THET8
11 PsiBlast_PDB 66.0934%-114 - C1 -2R5E 8.7 ?
22 PsiBlast_CBE 66.0236%-113 - C1 -3E2Y 6.4 KAT3_MOUSE
3 PsiBlast_PDB 66.0036%-113 - C1 -3E2Z 5.3 KAT3_MOUSE
7 PsiBlast_PDB 65.9841%-123 - C1 -1V2E 3.0 ?
5 PsiBlast_PDB 65.8136%-113 - C1 -3E2F 2.9 KAT3_MOUSE
24 PsiBlast_CBE 65.7341%-122 - C1 -1V2E 3.3 ?
23 PsiBlast_CBE 65.6441%-121 - C1 -1V2F 4.7 ?
6 PsiBlast_PDB 65.2236%-113 - C1 -2ZJG 2.7 KAT3_MOUSE
10 PsiBlast_PDB 65.1834%-116 - C1 -2R5C 7.6 ?
16 PsiBlast_PDB 65.1533%-112 - C1 -1W7N 5.8 KAT1_HUMAN
41 PsiBlast_CBE 64.8834%-112 - C1 -1B5P 3.1 AAT_THET8
29 PsiBlast_CBE 64.5934%-115 - C1 -1YIY 5.6 ?
38 PsiBlast_CBE 64.5834%-109 - C1 -1GCK 5.0 AAT_THET8
43 PsiBlast_CBE 64.0534%-113 - C1 -1B5O 3.1 AAT_THET8
42 PsiBlast_CBE 63.9534%-112 - C1 -1B5O 3.2 AAT_THET8
53 PsiBlast_CBE 63.8734%-115 - C1 -5BJ4 3.2 AAT_THET8
27 PsiBlast_CBE 62.9636%-112 - C1 -2ZJG 2.6 KAT3_MOUSE
17 PsiBlast_PDB 62.9633%-109 - C1 -1W7M 2.7 KAT1_HUMAN
40 PsiBlast_CBE 62.7034%-112 - C1 -1B5P 2.9 AAT_THET8
52 PsiBlast_CBE 62.1634%-113 - C1 -5BJ4 3.2 AAT_THET8
39 PsiBlast_CBE 61.8634%-107 - C1 -1GCK 3.9 AAT_THET8