@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0869c: (2016-04-26 )
MTLTALGMPALRSRTNGIADPRVVPTTGPLVDTFGRVANDLRVSLTDRCNLRCSYCMPERGLRWLPGEQLLRPDELARLIHIAVTRLGVTSVRFTGGEPLLAHHLDEVVAATARLRPRPEISLTTNGVGLARRAGALAEAGLDRVNVSLDSIDRAHFAAITRRDRLAHVLAGLAAAKAAGLTPVKVNAVLDPTTGREDVVDLLRFCLERGYQLRVIEQMPLDAGHSWRRNIALSADDVLAALRPHFRLRPDPAPRGSAPAELWLVDAGPNTPRGRFGVIASVSHAFCSTCDRTRLTADGQIRSCLFSTEETDLRRLLRGGADDDAIEAAWRAAMWSKPAGHGINAPDFIQPDRPMSAIGG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GTP_A_9(2FB3)
MOAA_STAA8
[Raw transfer]




SAM_B_6(2FB2)
MOAA_STAA8
[Raw transfer]




SAM_A_5(1TV8)
MOAA_STAA8
[Raw transfer]




SAM_A_5(2FB2)
MOAA_STAA8
[Raw transfer]




POP_B_13(2FB3)
MOAA_STAA8
[Raw transfer]




SAM_A_5(1TV8)
MOAA_STAA8
[Raw transfer]




SAM_A_5(1TV8)
MOAA_STAA8
[Raw transfer]




SAM_B_6(1TV8)
MOAA_STAA8
[Raw transfer]




DTU_A_11(1TV8)
MOAA_STAA8
[Raw transfer]




SF4_A_6(1TV7)
MOAA_STAA8
[Raw transfer]




SF4_B_9(1TV8)
MOAA_STAA8
[Raw transfer]




SF4_B_12(2FB3)
MOAA_STAA8
[Raw transfer]




SF4_B_8(1TV7)
MOAA_STAA8
[Raw transfer]




SF4_B_11(2FB3)
MOAA_STAA8
[Raw transfer]




5AD_A_10(2FB3)
MOAA_STAA8
[Raw transfer]




23 PsiBlast_CBE 94.6935%-116 * C4 *1TV7 3.6 MOAA_STAA8
2 PsiBlast_PDB 94.6335%-117 - C4 -1TV8 5.8 MOAA_STAA8
1 PsiBlast_PDB 94.1335%-114 - C4 -1TV7 3.6 MOAA_STAA8
21 PsiBlast_CBE 93.5135%-118 - C4 -2FB3 3.6 MOAA_STAA8
22 PsiBlast_CBE 93.4935%-117 - C4 -1TV8 5.2 MOAA_STAA8
4 PsiBlast_PDB 93.2234%-115 - C4 -2FB2 6.1 MOAA_STAA8
24 PsiBlast_CBE 93.2034%-118 - C4 -2FB2 6.1 MOAA_STAA8
3 PsiBlast_PDB 92.3435%-112 - C4 -2FB3 5.3 MOAA_STAA8
50 Fugue 91.9233%-108 - C4 -1TV8 5.8 MOAA_STAA8
25 HHSearch 87.9233%-101 - C4 -1TV8 5.8 MOAA_STAA8
52 Fugue 65.5917% -58 - C4 -4K36 - ANSME_CLOP1 -
26 HHSearch 57.9618% -65 - C4 -4K36 - ANSME_CLOP1 -
51 Fugue 49.7218% -60 - C4 -4M7T - BTRN_BACCI -
58 Fugue 49.1216% -42 - C4 -1R30 - BIOB_ECOLI -
56 Fugue 48.3715% -56 - C2 -4QHW - ? -
54 Fugue 48.1512% -50 - C4 -1OLT - HEMN_ECOLI -
38 HHSearch 47.3420% -63 - C4 -1R30 - BIOB_ECOLI -
28 HHSearch 46.0315% -81 - C4 -2A5H - KAMA_CLOSU -
36 HHSearch 44.8621% -69 - C4 -3RFA - RLMN_ECOLI -
42 HHSearch 44.1015% -69 - C4 -1OLT - HEMN_ECOLI -