@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0973c: (2016-04-27 )
MGITRVLVANRGEIARRVFATCRRLGLGTVAVYTDPDAAAPHVAEADARVRLPQTTDYLNAEAIIAAAQAAGADAVHPGYGFLSENAEFAAAVQEAGLTWVGPPVDAVRAMGSKIESKKLMAAAGVPVLEELDPDAVTTAQLPVLVKASAGGGGRGMRVVHELSALPAEVEAARREAQSAFGDPTVFCERYLPTGHHVEVQVMADTHGTVWAVGERECSIQRRHQKIIEEAPSPLVERVPGMRAKLFDAARLAASAIGYTGAGTVEFLADDSPGREGEFYFLEMNTRLQVEHPVTEETTGLDLVELQLMIADCGRLDTEPPPAQGYSIEARLYAEDPAHGWQPQAGVMHTIEVPGVRAQFDSLGQRTGIRLDSGIVDGSTVSIHYDPMLAKVVSYGATRRQAALVLADALVRARLHGLRTNRELLVNVLRHPAFLDGATDTGFFDTHGMAELSTPLADTATLRLSAIAAALADAEHNRASAGVFSSIPSGWRNLASGYQVKTYRDDADTEHRVEYRFTRTGLALPGDPVVQLVSADVDQVVLAQDGVAHGFTVARHGPDVYVDSARGPVHLVALSRFPEPSSAVEQGSLVAPMPGNVIRIGAEVGDTVTAGQPLIWLEAMKMEHTIAAPADGVLTHVSVNTGQQVEVGAILARVEAPQNGPAEGDSP

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ACP_A_3(4MV8)
ACCC_HAEIN
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ACP_A_2(4MV3)
ACCC_HAEIN
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4MV1)
ACCC_HAEIN
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




OA5_A_3(2W6Q)
ACCC_ECOLI
[Raw transfer]




LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




OA5_B_5(2W6Q)
ACCC_ECOLI
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




L21_A_3(2W6Z)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




OA1_B_5(2W6M)
ACCC_ECOLI
[Raw transfer]




OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]




OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




OA1_A_3(2W6M)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




1 PsiBlast_PDB 88.9142% -87 - C2 -3U9S - ? -
21 PsiBlast_CBE 86.9935% -85 - C2 -3N6R - ? -
23 PsiBlast_CBE 86.7535% -85 - C2 -3N6R - ? -
22 PsiBlast_CBE 86.6335% -84 - C2 -3N6R - ? -
25 PsiBlast_CBE 84.6935% -82 - C2 -3N6R - ? -
115 HHSearch 84.6344% -83 - C2 -3U9T - ? -
116 HHSearch 84.5236% -85 - C2 -3N6R - ? -
24 PsiBlast_CBE 84.5035% -82 - C2 -3N6R - ? -
125 HHSearch 84.4941% -90 - C2 -2DZD - ? -
3 PsiBlast_PDB 84.4335% -82 - C2 -3N6R - ? -
129 HHSearch 84.1044% -84 - C2 -4MV4 5.8 ACCC_HAEIN
2 PsiBlast_PDB 83.8542% -81 - C2 -3U9T - ? -
4 PsiBlast_PDB 83.6441% -81 - C2 -2VQD 7.5 ACCC_PSEAE
140 Fugue 83.2631% -65 - C2 -3VA7 - ? -
81 PsiBlast_CBE 82.8740% -85 - C2 -2V5A 5.9 ACCC_ECOLI
12 PsiBlast_PDB 82.8338% -88 - C2 -2DZD - ? -
127 HHSearch 82.7341% -87 - C2 -3OUZ 5.7 ?
57 PsiBlast_CBE 82.6640% -85 - C2 -3G8C 6.3 ACCC_ECOLI
65 PsiBlast_CBE 82.4540% -84 - C2 -2W70 3.7 ACCC_ECOLI
70 PsiBlast_CBE 82.4040% -84 - C2 -2W6Q 4.1 ACCC_ECOLI
63 PsiBlast_CBE 82.3840% -86 - C2 -2W71 6.6 ACCC_ECOLI
8 PsiBlast_PDB 82.3742% -85 - C2 -4MV4 5.8 ACCC_HAEIN
84 PsiBlast_CBE 82.3340% -85 - C2 -2V58 5.8 ACCC_ECOLI
83 PsiBlast_CBE 82.3140% -85 - C2 -2V59 5.0 ACCC_ECOLI
73 PsiBlast_CBE 82.2840% -87 - C2 -2W6O 3.8 ACCC_ECOLI
74 PsiBlast_CBE 82.2740% -84 - C2 -2W6N 5.6 ACCC_ECOLI
69 PsiBlast_CBE 82.2640% -86 - C2 -2W6Q 4.9 ACCC_ECOLI
97 PsiBlast_CBE 82.2539% -86 - C2 -3G8D 5.2 ACCC_ECOLI
76 PsiBlast_CBE 82.2440% -85 - C2 -2W6M 3.7 ACCC_ECOLI
96 PsiBlast_CBE 82.2139% -84 - C2 -3RV4 8.2 ACCC_ECOLI
28 PsiBlast_CBE 82.1539% -82 - C2 -3JZF 9.4 ACCC_ECOLI
7 PsiBlast_PDB 82.1442% -90 - C2 -4MV3 5.0 ACCC_HAEIN
68 PsiBlast_CBE 82.0940% -85 - C2 -2W6Z 4.6 ACCC_ECOLI
64 PsiBlast_CBE 82.0240% -85 - C2 -2W71 6.6 ACCC_ECOLI
75 PsiBlast_CBE 82.0040% -85 - C2 -2W6N 5.6 ACCC_ECOLI
66 PsiBlast_CBE 81.9840% -85 - C2 -2W70 3.8 ACCC_ECOLI
126 HHSearch 81.9039% -78 - C2 -2VPQ 6.6 ?
85 PsiBlast_CBE 81.8640% -84 - C2 -2V58 5.7 ACCC_ECOLI
92 PsiBlast_CBE 81.7840% -81 - C2 -3RUP 6.8 ACCC_ECOLI
90 PsiBlast_CBE 81.7340% -84 - C2 -3RV3 6.3 ACCC_ECOLI
82 PsiBlast_CBE 81.7340% -85 - C2 -2V59 5.2 ACCC_ECOLI
58 PsiBlast_CBE 81.7040% -84 - C2 -3G8C 6.1 ACCC_ECOLI
77 PsiBlast_CBE 81.6540% -84 - C2 -2W6M 3.7 ACCC_ECOLI
71 PsiBlast_CBE 81.6040% -84 - C2 -2W6P 5.0 ACCC_ECOLI
27 PsiBlast_CBE 81.5839% -83 - C2 -3JZI 9.2 ACCC_ECOLI
16 PsiBlast_PDB 81.5139% -81 - C2 -3JZI 7.8 ACCC_ECOLI
91 PsiBlast_CBE 81.4740% -83 - C2 -3RV3 7.2 ACCC_ECOLI
87 PsiBlast_CBE 81.4340% -85 - C2 -2J9G 5.8 ACCC_ECOLI
93 PsiBlast_CBE 81.3940% -81 - C2 -3RUP 7.2 ACCC_ECOLI
6 PsiBlast_PDB 81.3442% -90 - C2 -4MV1 4.6 ACCC_HAEIN
79 PsiBlast_CBE 81.1040% -89 - C2 -2VR1 4.5 ACCC_ECOLI
72 PsiBlast_CBE 80.9840% -85 - C2 -2W6O 3.7 ACCC_ECOLI
106 PsiBlast_CBE 80.8037% -79 - C2 -2VPQ 6.8 ?
105 PsiBlast_CBE 80.8037% -80 - C2 -2VPQ 5.9 ?
9 PsiBlast_PDB 80.7342% -88 - C2 -4MV8 5.0 ACCC_HAEIN
11 PsiBlast_PDB 80.7242% -90 - C2 -4RZQ 3.1 ACCC_HAEIN
86 PsiBlast_CBE 80.6540% -87 - C2 -2J9G 5.8 ACCC_ECOLI
94 PsiBlast_CBE 80.5139% -84 - C2 -1DV2 3.9 ACCC_ECOLI
95 PsiBlast_CBE 80.2339% -84 - C2 -1DV2 5.6 ACCC_ECOLI
123 HHSearch 75.1942% -87 - C2 -3VA7 2.1 ?
13 PsiBlast_PDB 73.5240% -88 - C2 -3VA7 2.1 ?